DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and Fhl2

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_113865.1 Gene:Fhl2 / 63839 RGDID:61963 Length:279 Species:Rattus norvegicus


Alignment Length:215 Identity:63/215 - (29%)
Similarity:96/215 - (44%) Gaps:38/215 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTESIVCHKCQEAI-TKRMI------------------------TALG----------KTWHPEH 30
            |||...||.|.|:: .|:.|                        |.:|          :.||...
  Rat     1 MTERFDCHHCNESLYGKKYILKEENPHCVACFEELYANTCEECGTPIGCDCKDLSYKDRHWHEGC 65

  Fly    31 FLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCKKPILEKT--ICAMGESWHEDCFCCG 93
            |.|..|...::|..|..:..:.:|..|:...|:..|..|||.|:..|  :...|.||||.||.| 
  Rat    66 FHCSRCGSSLVDKPFAAKEEQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFTC- 129

  Fly    94 GACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITDSAVLAMNVKWHRDCFRCNKCENP 158
            ..|::|:..::|..::.:.:|...||..:|.:|.:|:||||...|...:..|||:||.|..|:..
  Rat   130 QRCQQPIGTKSFIPKENQNFCVPCYEKQYALQCVQCKKPITTGGVTYRDQPWHRECFVCTACKKQ 194

  Fly   159 ITSQTFTIDGDKPVCPACNC 178
            ::.|.||...:.|.|..|.|
  Rat   195 LSGQRFTARDEFPYCLTCFC 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 19/49 (39%)
LIM 7..58 CDD:413332 16/85 (19%)
LIM 66..118 CDD:413332 18/53 (34%)
Fhl2NP_113865.1 LIM <5..33 CDD:413332 6/27 (22%)
LIM 36..97 CDD:413332 11/60 (18%)
LIM2_FHL2 101..157 CDD:188810 20/56 (36%)
LIM 162..218 CDD:413332 21/53 (40%)
LIM4_FHL2 221..278 CDD:188817
Blue background indicates that the domain is not in the aligned region.

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