DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and pxnb

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_021334029.1 Gene:pxnb / 565130 ZFINID:ZDB-GENE-130530-697 Length:1197 Species:Danio rerio


Alignment Length:168 Identity:63/168 - (37%)
Similarity:98/168 - (58%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            ||..|.:.|..:::||:|:|||||||:|.||.|:|....|..:.|:|.|.:.:...::..|..|.
Zfish   963 VCGACSKPIVGQVVTAMGRTWHPEHFVCTHCQEEIGSRNFFEREGQPYCERDYHHLFSPRCYYCN 1027

  Fly    71 KPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITD 135
            .|||:|.:.|:..:||.:.|.| ..|......:.|:|:|||.||:|||.||||.:|..|.:.|.:
Zfish  1028 GPILDKVVTALDRTWHPEHFFC-AQCGAFFGPEGFHEKDGKAYCRKDYFDLFAPKCGGCARAILE 1091

  Fly   136 SAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVC 173
            :.:.|::..||.:||.|.:|..|..:.:|.....:|.|
Zfish  1092 NYISALSSLWHPECFVCRECFTPFVNGSFFEHDGQPYC 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 14/48 (29%)
LIM 7..58 CDD:413332 22/50 (44%)
LIM 66..118 CDD:413332 20/51 (39%)
pxnbXP_021334029.1 Paxillin 96..272 CDD:460962
PHA03247 <178..684 CDD:223021
LIM1_Paxillin_like 964..1016 CDD:259830 22/51 (43%)
LIM2_Paxillin_like 1023..1074 CDD:188723 20/51 (39%)
LIM3_Paxillin_like 1082..1134 CDD:188724 14/48 (29%)
LIM4_Paxillin 1141..1192 CDD:188795
Blue background indicates that the domain is not in the aligned region.

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