DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and lpxn

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_689239.4 Gene:lpxn / 560743 ZFINID:ZDB-GENE-081105-159 Length:405 Species:Danio rerio


Alignment Length:168 Identity:67/168 - (39%)
Similarity:97/168 - (57%) Gaps:3/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCKK 71
            |..|.:.|..:||||||:.||||||:|..|.|::....|..:.|:|.|.|.:.:.::..||.||.
Zfish   172 CASCGKCIAGKMITALGQVWHPEHFVCSACREELGTCGFFERDGKPYCEKDYQKLFSPRCAYCKG 236

  Fly    72 PILEKTICAMGESWH-EDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITD 135
            ||.:..:.||.::|| |..|||  .|......:.:.||||||||.:|:..|||.:|:.|.:|:.:
Zfish   237 PITQNILTAMDQTWHPEHFFCC--HCGDLFGPEGYLERDGKPYCSRDFYCLFAPKCSGCGEPVKE 299

  Fly   136 SAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVC 173
            :.:.|.|..||.|||.|:.|..|.|...|.....:|:|
Zfish   300 NYLSAANGTWHPDCFVCSDCLKPFTDGCFLELNGRPLC 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 17/48 (35%)
LIM 7..58 CDD:413332 23/50 (46%)
LIM 66..118 CDD:413332 23/52 (44%)
lpxnXP_689239.4 LIM1_Paxillin_like 172..224 CDD:259830 23/51 (45%)
LIM2_Leupaxin 231..282 CDD:188792 23/52 (44%)
LIM3_Leupaxin 290..342 CDD:188794 17/48 (35%)
LIM4_Leupaxin 349..400 CDD:188796
Blue background indicates that the domain is not in the aligned region.

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