DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and fhl3

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001008165.1 Gene:fhl3 / 493527 XenbaseID:XB-GENE-947662 Length:279 Species:Xenopus tropicalis


Alignment Length:177 Identity:59/177 - (33%)
Similarity:88/177 - (49%) Gaps:7/177 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAIT--KRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGC 69
            |..|::.:.  .|.:...|:|||...|:|:.|.:.|...:|..::....|..|:..:....|..|
 Frog   101 CISCEKTVMPGSRKLEYNGQTWHEHCFICNSCQQPIGSRSFIPENQNHYCIPCYESKLAPRCTHC 165

  Fly    70 KKPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPIT 134
            ||.:.:..:....|.||::||.|.| ||..||.|.|..:|.||||.|.:.:|:|.:||.|.||||
 Frog   166 KKSLTKGGVTYRDEPWHKECFVCTG-CKTQLAGQQFTSQDEKPYCIKCFGNLYAKKCAGCTKPIT 229

  Fly   135 D----SAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVCPACN 177
            .    ..|......||..||.|::|...:..:.|..|.:..:|.|||
 Frog   230 GFGGAKYVSFEERHWHHSCFNCSRCSTSLVGKGFIPDNEDILCRACN 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 17/53 (32%)
LIM 7..58 CDD:413332 13/52 (25%)
LIM 66..118 CDD:413332 23/51 (45%)
fhl3NP_001008165.1 LIM <5..33 CDD:413332
LIM1_FHL3 36..94 CDD:188807
LIM2_FHL3 98..155 CDD:188811 14/53 (26%)
LIM3_FHL 162..213 CDD:188732 23/51 (45%)
LIM4_FHL3 221..276 CDD:188818 18/54 (33%)
Blue background indicates that the domain is not in the aligned region.

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