DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and fhl5

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001004112.1 Gene:fhl5 / 445475 ZFINID:ZDB-GENE-040822-3 Length:280 Species:Danio rerio


Alignment Length:176 Identity:55/176 - (31%)
Similarity:82/176 - (46%) Gaps:7/176 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAIT--KRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGC 69
            |..|::.:.  .|.:...|.:||...|||..|.:.|...:|..:.....|..||.:::.|.|..|
Zfish   102 CSTCKKTVMPGSRKMEYKGNSWHETCFLCQRCQQPIGTKSFIPKDNNYFCVPCFEKQFAYQCCAC 166

  Fly    70 KKPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPIT 134
            ||.|....:....:.||.:||.|.| ||:.||.|.|..|:..|||...:.:|:|.:|..|.|.||
Zfish   167 KKAITTGGVTYHDKPWHRECFTCIG-CKRQLAGQRFTSRENYPYCLDCFSNLYAKKCVGCTKAIT 230

  Fly   135 DSA----VLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVCPAC 176
            ..|    :.....:||.:||.|.:|...:..:.|....|..:|..|
Zfish   231 SLAGAKYISFEERQWHSECFTCMQCSVSLVGRGFLTQRDDILCTDC 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 15/53 (28%)
LIM 7..58 CDD:413332 13/52 (25%)
LIM 66..118 CDD:413332 21/51 (41%)
fhl5NP_001004112.1 LIM1_FHL 37..95 CDD:188729
LIM 102..158 CDD:413332 15/55 (27%)
LIM3_FHL 163..214 CDD:188732 21/51 (41%)
LIM4_FHL 222..277 CDD:188733 16/55 (29%)
Blue background indicates that the domain is not in the aligned region.

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