DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and pxl1

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_596112.1 Gene:pxl1 / 2540856 PomBaseID:SPBC4F6.12 Length:438 Species:Schizosaccharomyces pombe


Alignment Length:171 Identity:46/171 - (26%)
Similarity:84/171 - (49%) Gaps:1/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAI-TKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            ||.|..:: ..|:|:|.||..||:.|.|..|.:.:....|..:.|:..|:..:.|:::..|..||
pombe   258 CHSCGGSLRAGRIISASGKKLHPQCFKCDTCSQNLEHVGFYYREGKFYCHLDYHEQFSPRCKHCK 322

  Fly    71 KPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITD 135
            .||.::.:....:.:||:...|.|..:....|.....||...:|:..|::.:|.:|.||.|||..
pombe   323 TPIEDQAVHINNDWFHENHHFCAGCSEVFNVNIPCIYRDDLYWCQTCYDNKYAVKCKKCRKPILG 387

  Fly   136 SAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVCPAC 176
            .:|...:.::|..|:.|..|...:..:.:.:..:.|:|..|
pombe   388 ISVKGSDGEYHSQCWTCGACNALLGDEGYFMIENTPICRPC 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 13/49 (27%)
LIM 7..58 CDD:413332 16/51 (31%)
LIM 66..118 CDD:413332 13/51 (25%)
pxl1NP_596112.1 LIM 258..314 CDD:395333 17/55 (31%)
LIM 318..370 CDD:259829 13/51 (25%)
LIM 378..428 CDD:259829 13/49 (27%)

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