DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and pin-2

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001255672.1 Gene:pin-2 / 178234 WormBaseID:WBGene00004030 Length:330 Species:Caenorhabditis elegans


Alignment Length:175 Identity:47/175 - (26%)
Similarity:84/175 - (48%) Gaps:8/175 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAI-TKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            |:||::.: ...::|.....:|..||.|..| :::|::.......:..|.:|| :.....|..||
 Worm   144 CNKCKQHVDNSDLLTYQENPYHAYHFKCTTC-KKVLESDARTIKDDLFCPRCF-DFKCEVCFDCK 206

  Fly    71 K---PILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKP 132
            |   |.:|::|..|.:.||.|.|.| ..|.:|......||::||.||:.|:.:|....|..|::.
 Worm   207 KVIDPQVEQSIFTMNKHWHTDHFRC-ATCARPFFGHEHYEKNGKAYCRDDFLELIGHHCFICDRN 270

  Fly   133 ITDSAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGD-KPVCPAC 176
            :....|......:..:|:||..|:..:..:...::.| .|:|..|
 Worm   271 VGGGMVHVFGKAFCPECYRCRGCDKVLHYKDKVMELDLMPLCKKC 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 10/50 (20%)
LIM 7..58 CDD:413332 11/51 (22%)
LIM 66..118 CDD:413332 21/54 (39%)
pin-2NP_001255672.1 LIM1_PINCH 21..79 CDD:188717
LIM 82..133 CDD:413332
LIM 144..195 CDD:413332 11/51 (22%)
LIM4_PINCH 200..256 CDD:188720 21/56 (38%)
LIM 264..315 CDD:413332 10/50 (20%)
Blue background indicates that the domain is not in the aligned region.

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