DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and pxl-1

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001021185.2 Gene:pxl-1 / 175831 WormBaseID:WBGene00016197 Length:413 Species:Caenorhabditis elegans


Alignment Length:167 Identity:54/167 - (32%)
Similarity:90/167 - (53%) Gaps:1/167 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCKK 71
            |..|.:.|..:::.||||.|||||:.|..|..::....|..::|...|.:.:..:::..|.||.:
 Worm   176 CAACGKPIIGQVVIALGKMWHPEHYTCCECGAELGQRPFFERNGRAFCEEDYHNQFSPKCQGCHR 240

  Fly    72 PILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARCAKCEKPITDS 136
            .|.::.:..|.:::|.:||.| ..|.:|.....|:|::|:.|||:|:..|||.:|..|.:|||.:
 Worm   241 AITDRCVSVMNKNFHIECFTC-AECNQPFGEDGFHEKNGQTYCKRDFFRLFAPKCNGCSQPITSN 304

  Fly   137 AVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDKPVC 173
            .:.|:...||.|||.|..|.......:|......|:|
 Worm   305 FITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLC 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 16/48 (33%)
LIM 7..58 CDD:413332 17/50 (34%)
LIM 66..118 CDD:413332 17/51 (33%)
pxl-1NP_001021185.2 LIM1_Leupaxin 174..228 CDD:188790 17/51 (33%)
LIM 235..290 CDD:395333 18/55 (33%)
LIM3_Paxillin_like 294..346 CDD:188724 16/48 (33%)
LIM4_Paxillin_like 353..404 CDD:188725
Blue background indicates that the domain is not in the aligned region.

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