DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31937 and rdh8b

DIOPT Version :10

Sequence 1:NP_608616.2 Gene:CG31937 / 326177 FlyBaseID:FBgn0031360 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_957082.2 Gene:rdh8b / 393761 ZFINID:ZDB-GENE-040426-1759 Length:317 Species:Danio rerio


Alignment Length:203 Identity:58/203 - (28%)
Similarity:105/203 - (51%) Gaps:14/203 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LSSMRGQVVWITGASSGIGRALALSLARHGVK---LVLSARRLEQLEQVQEECLAAARGLLATKD 102
            ::|...:||.|||.|||||..:|:.|||...:   ::.:.|.|:     :::.|..|.|....|.
Zfish     1 MASAGQKVVLITGCSSGIGLGIAVMLARDKQQRYYVIATMRDLK-----RQDKLVCAAGDTYGKT 60

  Fly   103 VLVIQMDMLDLDEHKTHLNTVLNHFHRLDVLVNNAGRSQRASWTEVEIEVDRELFELDVFAVVHL 167
            :.|..:|:...:..:..:::|.:  ..:|:|:||||.........:.::...::||.:.|..|.:
Zfish    61 LTVCTLDVCSNESVRQCVDSVKD--RHIDILINNAGVGLVGPVEGLSLDDMMKVFETNFFGAVRM 123

  Fly   168 SRLVVRYFVEQNGGRGHIAATSSIAGFSPVPFSPTYCAAKHALNAYLLSLKVEMRKLDV--SLFA 230
            .:.|:....::..  |||...||:.|...|.|:..|.|:|.|:..:..||.|::.|.:|  |:..
Zfish   124 IKEVMPDMKKRRS--GHIIVISSVMGLQGVAFNDVYAASKFAIEGFCESLAVQLLKFNVTMSMIE 186

  Fly   231 PGPIATDF 238
            |||:.|:|
Zfish   187 PGPVHTEF 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31937NP_608616.2 Rossmann-fold NAD(P)(+)-binding proteins 44..293 CDD:473865 57/200 (29%)
rdh8bNP_957082.2 type1_17beta-HSD-like_SDR_c 7..264 CDD:187666 57/197 (29%)

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