DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31689 and Abcg4

DIOPT Version :10

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_001100286.2 Gene:Abcg4 / 300664 RGDID:1305840 Length:646 Species:Rattus norvegicus


Alignment Length:615 Identity:219/615 - (35%)
Similarity:350/615 - (56%) Gaps:38/615 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SPFNIIFEDLYYRVEVG---KDREKKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNILTGLTKS 81
            |..:|.|.:|.|.|..|   :.|..|::||.:.|.|...||..||||||||||:.||||.|..:|
  Rat    57 SAVDIEFVELSYSVREGPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRES 121

  Fly    82 GVSGKI-------EIGKARKLCGYIMQDDHFFPYFTVEETMLMAATLKISNQCVSLKEKRTLIDY 139
            |:.|:|       ::...||:..||||||...|:.||.|.|:::|.||:|.:   .:.|:.|:..
  Rat   122 GMKGQILVNGRPRDLRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEK---QEVKKELVTE 183

  Fly   140 LLNSLKLTKTRQTKCSNLSGGQKKRLSIALELIDNPAVLFLDEPTTGLDSSSSFDTIQLLRGLAN 204
            :|.:|.|.....|:.:.|||||:|||:|||||::||.|:|.||||:||||:|.|..:.|::.||:
  Rat   184 ILTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAH 248

  Fly   205 EGRTIVCTIHQPSTNIYNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPYHNPADFLLECA 269
            .|||::|||||||..::.:|:.:|:||.|:|.::|...|.:.:|..:||.||.|||||||::|.|
  Rat   249 GGRTVICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVA 313

  Fly   270 NGDYGDQTEALAEAAKDIRWRYDQQLMQGEDADAPSETQVAKFNESQSPGQVQVQVQKIEIQNME 334
            :|:|||....|..|.:      :......|...:|.:.:|.....:..|          |:..:|
  Rat   314 SGEYGDLNPMLFRAVQ------NGLCTMAEKKSSPEKNEVPAHCPTCPP----------ELDPIE 362

  Fly   335 SSKDLTKHTYPPTEYMRLWLLIGRCHLQFFRDWTLTYLKLGIHVLCSILIGLFFGDSGSNATKQI 399
            |      ||:..:...:..:|..|..|...||..||:|:...|||..:||||.:...|.:|:|..
  Rat   363 S------HTFATSTLTQFCILFRRTFLSILRDTVLTHLRFMSHVLIGVLIGLLYLHIGDDASKVF 421

  Fly   400 SNVGMIMIHCVYLWYTTIMPGILRYPAEIEIIRKETFNNWYKLRTYYLATIITSTPVHIIFSTVY 464
            :|.|.:....::|.:..:||.:|.:|.|:.:..:|..|.||.|:.||||..:...|..::...||
  Rat   422 NNTGFLFFSMLFLMFAALMPTVLTFPLEMAVFMREHLNYWYSLKAYYLAKTMADVPFQVVCPVVY 486

  Fly   465 ITIGYLMTDQPVEMDRFVKYLLSAVVVTICADGLGVFLGTVLNPVN-GTFVGAVSTSCMLMFSGF 528
            .:|.|.||.||.|..||:.:...::...:.|..||:.:|.....:. .||||.|:...:|:||||
  Rat   487 CSIVYWMTGQPAETSRFLLFSALSIATALVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGF 551

  Fly   529 LILLNHIPAAMRFMAYISPLRYALENMVISLYGNQRGQLICPPTEFYCHFKNAVTVLRQFGMEDG 593
            .:....||..:::.:|:|.:||..|.:::::||.:||.|.|  .|.:|.|::...:|.:..:|:.
  Rat   552 FVSFKTIPTYLQWSSYLSYVRYGFEGLILTIYGMERGHLTC--LEDHCPFRDPQIILHELDVEEA 614

  Fly   594 DFGHNILMILIQIAIFKVLSYFTLKHKIKT 623
            ....:.|::.|.....::|:|..|::::|:
  Rat   615 KLYMDFLVLGIFFLALRLLAYLVLRYRVKS 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 218/612 (36%)
Abcg4NP_001100286.2 3a01204 44..646 CDD:273361 219/615 (36%)

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