DRSC/TRiP Functional Genomics Resources

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Protein Alignment TH1 and Nelfcd

DIOPT Version :10

Sequence 1:NP_573123.1 Gene:TH1 / 32607 FlyBaseID:FBgn0010416 Length:578 Species:Drosophila melanogaster
Sequence 2:NP_065605.3 Gene:Nelfcd / 57314 MGIID:1926424 Length:582 Species:Mus musculus


Alignment Length:576 Identity:316/576 - (54%)
Similarity:438/576 - (76%) Gaps:9/576 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SGWQGRAKGQTNPEETL---EDNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVIS 69
            |.|...|.|..:.|:..   ||:.: ..||||.||.|.||||||.||..||||||:|||||.||.
Mouse    10 SEWGEEADGGQHQEDDSGEGEDDAE-VQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQ 73

  Fly    70 MLSENYKAVAQMANLLAEWLILAGVKVTEVQAMVENHLKEMILKSFDPKKADTIFTEEGETPDWL 134
            :|||||.||||..||||||||..||:..:||..||||||.:::|.|||:|||:|||||||||.||
Mouse    74 LLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWL 138

  Fly   135 TEMIDHYTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQSEITSISTAAQQIEVFSRVLKTSIVK 199
            .:||.|.|||.|.|:|||.:|||||||||:|||||||:|.||||:|||.||:|||||||:||:..
Mouse   139 EQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLAT 203

  Fly   200 FLN-NPDDVHGAIQECARMVCHGQHTYVYSQVLIQVLSQEQKGGFNMKRLSQEIIKYALQNNQNV 263
            .|: ..:::...:.|.|:|||||:|||:::|.::.||:||::||..::|::||:.::|.:...:.
Mouse   204 ILDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDA 268

  Fly   264 TPITMALNGSAVYPQACQALTSMLTRNTLNPADITVLFRNYSGSDPPPIDLIRNPQFLELLVDAL 328
            :.||:||..:|.||:|||||.:||:|..||||||||||:.::..||||::|||.|.||:|.:.:|
Mouse   269 SQITLALGTAASYPRACQALGAMLSRGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSL 333

  Fly   329 FRSGVKINPEHKPKYMFLLAYASAVIDQPAKKRPMTERMLNKEELKSTIQAIEKAHTI-CNVDQG 392
            |:.|.|||.:||.||:.:||||::|::...|.:.::   :.|:|||||.:|||..|.: ||.::|
Mouse   334 FKPGAKINQDHKHKYIHILAYAASVVETWKKNKRVS---IGKDELKSTSKAIETVHNLCCNENKG 395

  Fly   393 STELIAELQTLYNCIKYPVVGVGVIRWIENVVMEPSYFKLSTDSCPTHLAVLDEVAAVHPTLQQQ 457
            ::||:|||.|||.||::|||.:||::|::..|.||.||:|.||..|.|||:|||::..|..|..|
Mouse   396 ASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQ 460

  Fly   458 ILFLLIRLFESKQDELEILVQLEMKKMILDRMVNLLTRGCVVPVLRYIKQCCAIEDTDISLIRYF 522
            :|.||::|||::..:|:::.|||:||.:|||||:||:||.|:||:.||::|....||||||||||
Mouse   461 VLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYF 525

  Fly   523 VTEVLETITHPYSPEFVQLFLPMVENEEITGTMRGEGDNDPVSEFIVHCKAHYTTV 578
            |||||:.|..||:.:|||||||::||:.|.||::.||::|||:|||.|||:::..|
Mouse   526 VTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKAEGEHDPVTEFIAHCKSNFIVV 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TH1NP_573123.1 TH1 2..576 CDD:398497 315/572 (55%)
NelfcdNP_065605.3 TH1 2..579 CDD:398497 315/572 (55%)

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