DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8939 and LOC1278793

DIOPT Version :10

Sequence 1:NP_573099.1 Gene:CG8939 / 32568 FlyBaseID:FBgn0030720 Length:817 Species:Drosophila melanogaster
Sequence 2:XP_061497225.1 Gene:LOC1278793 / 1278793 VectorBaseID:AGAMI1_005471 Length:307 Species:Anopheles gambiae


Alignment Length:319 Identity:108/319 - (33%)
Similarity:147/319 - (46%) Gaps:50/319 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGKTRKDK---FYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPV 68
            :|||.|||   :|:||||.|.|:|:|||||.::..|.........:|||||||.|.||..:.:..
Mosquito     1 MGKTSKDKRDIYYRLAKEEGWRARSAFKLIHIDEVFQIFDGVTRAVDLCAAPGSWSQVLSKRLYE 65

  Fly    69 SS--------IVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKEL-QSWKADVVLHDGAPNVGR 124
            |.        .:|.|||..:.|:.|.|.|..|||.....:::.:.. ...||.:|:.||||:|..
Mosquito    66 SRDPAERDEVKIIAVDLQTMGPLPGIIQLQGDITKLSTAEAIIEHFGDQQKAQLVICDGAPDVTG 130

  Fly   125 NWLYDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKE 189
            ....|.|.|..|.|.||.::|..|..||.||.|:||.||.:.|...|:..|::|...||.:||..
Mosquito   131 LHDIDEYIQSQLLLAALNITTHVLTPGGTFVAKIFRGKDTSLLYSQLRIFFERVTIAKPPSSRNS 195

  Fly   190 SAEIFVVCQGYLAPDHIDPRL----LDSKYV---------------------FEELDLDAKKKSS 229
            |.|.|||||.|..|:...|:|    ||...|                     ..|.|.| ...|.
Mosquito   196 SIEAFVVCQDYRPPEGYVPQLINPMLDDVQVIACETSAPVNRSIVPFLVCGDLREFDSD-MSYSL 259

  Fly   230 LLHPEKQKRIKAEGYTAQDIALRNDLAATEFLKAENALAALQGIGSIRIDDQRIANHKK 288
            .:.|||.       |..:|: ::..||.......|.........|||:::    |:.||
Mosquito   260 NIDPEKD-------YEYRDV-VQKPLAPAYSEVLERMKTTSLKHGSIKVE----ADKKK 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8939NP_573099.1 RlmE 1..200 CDD:440062 83/204 (41%)
DUF3381 233..366 CDD:463375 14/56 (25%)
Spb1_C 610..803 CDD:462264
LOC1278793XP_061497225.1 None
Blue background indicates that the domain is not in the aligned region.

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