Protein Alignment exd and pbx1a

DIOPT Version :10

• Sequence 1: NP_523360.1
• Gene: exd / 32567
• FlyBaseID: FBgn0000611
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_571689.1
• Gene: pbx1a / 58138
• ZFINID: ZDB-GENE-000405-1
• Length: 428
• Species: Danio rerio
• Alignment Length: 408
• Identity: 273/408 - (66%)
• Similarity: 305/408 - (74%)
• Gaps: 46/408 - (11%)

  Fly     1 MEDPNRML--AHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDEAQA 63
            |:|..|::  :|..||....|.....||.  ..|:::|.||| |||.||||||:|::||||||||
Zfish     1 MDDQPRLMHSSHGVGMAGHPGLAQHMQDG--TGGADDEGRKQ-DIGNILQQIMTITDQSLDEAQA 62

  Fly    64 RKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGVAGPEKGGGGAA 128
            |||.|||||||||||:||||||||||||||..|||||||.|||||||||:||||:|||||||.||
Zfish    63 RKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDAQLMRLDNMLLAEGVSGPEKGGGSAA 127

  Fly   129 AASAAAASQGGSLSIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSR 193
            ||:||||:.|     .|:||:.|||||||||:|||||||.|||||||||||||||||||||||||
Zfish   128 AAAAAAAAGG-----VGSDNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSR 187

  Fly   194 TRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFY 258
            ||||:||||||||.|||:||||||||||||||||||||||||||||||||||:|||:||||||||
Zfish   188 TRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFY 252

  Fly   259 SHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSM 323
            |||||||||||||||||:||.|||||||||||||||||||||||.|||||:|||:.||.|:..|.
Zfish   253 SHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANMYAARTAANATSVST 317

  Fly   324 AGPPSGTTTPMMSPAPPQD--SMG-YPMGSG-------------------GYDQQQPYD------ 360
            .|..:.      ||:.|..  |.| :.|.||                   |.:.|...|
Zfish   318 HGSQAN------SPSTPNSAGSAGSFNMNSGDLFMSVQSLNGDSYQGAQVGANVQSQVDTLRHVI 376

  Fly   361 NSMGGYDPNL--HQDLSP 376
            :..|||..:|  .|..||
Zfish   377 SQTGGYSESLAASQIYSP 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
exd	NP_523360.1	PBC	42..237	CDD:461052	165/194 (85%)
		homeodomain	239..299	CDD:238039	55/59 (93%)
pbx1a	NP_571689.1	PBC	41..231	CDD:461052	165/194 (85%)
		homeodomain	233..293	CDD:238039	55/59 (93%)