DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment exd and PBX3

DIOPT Version :10

Sequence 1:NP_523360.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001397938.1 Gene:PBX3 / 5090 HGNCID:8634 Length:455 Species:Homo sapiens


Alignment Length:433 Identity:276/433 - (63%)
Similarity:298/433 - (68%) Gaps:83/433 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDPNRML---------AHT--GGM-MAPQGYGLSGQD-DGQNAGSENEVRKQKDIGEILQQIMS 52
            |:|.:|||         .|:  ||| :.|..:|..|.| ||         ||| |||:||.|||:
Human     1 MDDQSRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGDG---------RKQ-DIGDILHQIMT 55

  Fly    53 ISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGV 117
            |::||||||||:||.|||||||||||||||||||||.||||..|||:|||||||||||||:||||
Human    56 ITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGV 120

  Fly   118 AGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTT 182
            :|||||||.||||:|||||.|.|      ||:||||||||||.|||||||.||||||||||||||
Human   121 SGPEKGGGSAAAAAAAAASGGSS------DNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTT 179

  Fly   183 HVMNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSK 247
            |||||||||||||||:||||||||.|||:||||||||||||||||||||||||||||||||||||
Human   180 HVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSK 244

  Fly   248 QASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQ---------------------VSNWFGN 291
            ||:|||||||||||||||||||||||||:||.|||||                     |||||||
Human   245 QATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQSLVKDPKERGSKGSDIQPTSVVSNWFGN 309

  Fly   292 KRIRYKKNIGKAQEEANLYAAKKAAGASPYSMAGPPSGTTTPMMSPAPPQD----SMGYPMGSG- 351
            |||||||||||.||||||||||.|..|:....|...:..|.   ||..|..    |...| .|| 
Human   310 KRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTN---SPTTPNSGSSGSFNLP-NSGD 370

  Fly   352 ------------------GYDQQQPYD------NSMGGYDPNL 370
                              |.:.|...|      |..|||...|
Human   371 MFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYSDGL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_523360.1 PBC 42..237 CDD:461052 165/194 (85%)
homeodomain 239..299 CDD:238039 56/80 (70%)
PBX3NP_001397938.1 PBC 45..234 CDD:461052 165/194 (85%)
homeodomain 236..317 CDD:238039 56/80 (70%)

Return to query results.
Submit another query.