Protein Alignment exd and Pbx1

DIOPT Version :10

• Sequence 1: NP_523360.1
• Gene: exd / 32567
• FlyBaseID: FBgn0000611
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001128334.1
• Gene: Pbx1 / 304947
• RGDID: 1308213
• Length: 430
• Species: Rattus norvegicus
• Alignment Length: 355
• Identity: 263/355 - (74%)
• Similarity: 290/355 - (81%)
• Gaps: 17/355 - (4%)

  Fly     2 EDPNRMLAHTG-GMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDEAQARK 65
            |.|..|.:|.| ||....|.....||..  .|:|.|..:::|||:||||||:|::||||||||||
  Rat     3 EQPRLMHSHAGVGMAGHPGLSQHLQDGA--GGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARK 65

  Fly    66 HTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAA 130
            |.|||||||||||:||||||||||||||..|||||.|||||||||||:||||||||||||.||||
  Rat    66 HALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLLAEGVAGPEKGGGSAAAA 130

  Fly   131 SAAAASQGGSLSIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTR 195
            :|||||.|.     |:||::|||||||||:|||||||.|||||||||||||||||||||||||||
  Rat   131 AAAAASGGA-----GSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTR 190

  Fly   196 PITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSH 260
            ||:||||||||.|||:||||||||||||||||||||||||||||||||||:|||:||||||||||
  Rat   191 PISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSH 255

  Fly   261 LSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMAG 325
            |||||||||||||||:||||||||||||||||||||||||||.|||||:||||.|..|:..|..|
  Rat   256 LSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVTATNVSAHG 320

  Fly   326 PPSGTTTPMMSPAPPQ---DSMGYPMGSGG 352
            ..:.      ||:.|.   .|..:.|.:.|
  Rat   321 SQAN------SPSTPNSAGSSSSFNMSNSG 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
exd	NP_523360.1	PBC	42..237	CDD:461052	167/194 (86%)
		homeodomain	239..299	CDD:238039	56/59 (95%)
Pbx1	NP_001128334.1	PBC	42..232	CDD:461052	167/194 (86%)
		homeodomain	234..294	CDD:238039	56/59 (95%)