DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and Tgif1

DIOPT Version :10

Sequence 1:NP_523360.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001157547.1 Gene:Tgif1 / 21815 MGIID:1194497 Length:305 Species:Mus musculus


Alignment Length:213 Identity:51/213 - (23%)
Similarity:74/213 - (34%) Gaps:76/213 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNI--- 300
            ||:|.|..|::.:||.::.|.|..|.||||:.|..|:::..::..||.|||.|.|.|...::   
Mouse    69 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRK 133

  Fly   301 --------------GKAQEEANLYAAKKAAGASP-------YSMAGPPSGTTTPMMSPAPPQD-- 342
                          .|..|.:::.||.......|       :|....|:.|....:||.||..  
Mouse   134 DGKDPNQFTISRRGAKISEASSIEAAMGIKNFMPTLEESPFHSCVVGPNPTLGRPVSPKPPSPGS 198

  Fly   343 ---------------------SMGYPMGSG-GYDQQQ-------------PYDNSMGGYDPN--- 369
                                 |:..|:|.| ..|..|             |.|....|..||   
Mouse   199 ILARPSVICHTTVTALKDGPFSLCQPIGVGQSTDVPQIAPSNFTDTSLVYPEDTCKSGPSPNPQS 263

  Fly   370 ------------LHQDLS 375
                        |:||.|
Mouse   264 GLFNTPPPTPPDLNQDFS 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_523360.1 PBC 42..237 CDD:461052
homeodomain 239..299 CDD:238039 24/59 (41%)
Tgif1NP_001157547.1 Homeobox_KN 87..125 CDD:428673 16/37 (43%)
Blue background indicates that the domain is not in the aligned region.

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