Protein Alignment Lcch3 and glrba

DIOPT Version :10

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_068076972.1
• Gene: glrba / 83412
• ZFINID: ZDB-GENE-010410-2
• Length: 499
• Species: Danio rerio
• Alignment Length: 489
• Identity: 162/489 - (33%)
• Similarity: 254/489 - (51%)
• Gaps: 77/489 - (15%)

  Fly    39 NVTQTISN-ILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAF 102
            |.|..|.| :|..||.|:||||.|.|:...:::.|.||.:|.|..|||.:.::|.|.|.|.||..
Zfish    55 NSTSNILNRLLMTYDSRIRPNFKGIPVEDKVNIFINSFGSIQETTMDYRVNIFLRQRWNDPRLRL 119

  Fly   103 NIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYG 167
                      ..|..||.||:.....:.:|.||.||||:||:..||||:.|.|:.:..:|.|...
Zfish   120 ----------PTDFKSDALTVDPKMFQCLWKPDLFFANEKNANFHDVTQENILLFIFRNGDVLIS 174

  Fly   168 MRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP-TPVRGVEDAELPQFTI----I 227
            ||.:.||:|.:.|..:|:|:|.|.:::||:|||..|:|..|:. .||: :::..||||.:    |
Zfish   175 MRLSVTLSCPLALQLFPMDTQYCKMQLESFGYTTKDLVFMWQSGDPVQ-MDEIALPQFDVKQEDI 238

  Fly   228 GYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 292
            .| .|..|....||.|..:.:.|.|:|.:|:::...|.|::|||:|||:|||||.:|::|||.||
Zfish   239 KY-ANCTKFYPGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLG 302

  Fly   293 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKI--KK 355
            |.:||::::..|.:.|.||::||||||||:::.|.::.||:|:|||.|....   .:.|:|  :|
Zfish   303 ILSVLSLSSECTSLASELPKVSYVKAIDIWMIACLLYGFASLVEYAVVQVML---NSPKRIEAEK 364

  Fly   356 VKECCPGKIGKSERSETCST--------------TEDIIELQDVRMSPIPS-LRRGTYNATLDSI 405
            :|.....|..:.|......|              |..::|.:..::....| ||...::.
Zfish   365 IKMAEKEKAREKENKTPAKTNSANGTGGTPIHVSTLQVVENRCKKVCTSKSDLRSNDFSI----- 424

  Fly   406 GTETMNLGKFPPSFRITR--NYG--------TGHSQLRRRAQRGISTRPRMLHALKRGASAIKAT 460
                  :|..|..|.::.  .||        :|..| .:..::....:|.:..|.||
Zfish   425 ------VGSLPRDFELSNFDCYGKPIEVTDASGKPQ-NKNNKKPAPPKPVIPSAAKR-------- 474

  Fly   461 IPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYI 494
                     :|.|:|.:||.:||.||:.||..|:
Zfish   475 ---------VDLYARALFPFTFLFFNVIYWSVYL 499

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	161/486 (33%)
glrba	XP_068076972.1	LIC	53..498	CDD:455710	161/486 (33%)
		LGIC_ECD	80..265	CDD:475126	70/196 (36%)