Protein Alignment Lcch3 and Gabrq

DIOPT Version :10

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_063136356.1
• Gene: Gabrq / 65187
• RGDID: 68331
• Length: 644
• Species: Rattus norvegicus
• Alignment Length: 375
• Identity: 145/375 - (38%)
• Similarity: 238/375 - (63%)
• Gaps: 21/375 - (5%)

  Fly    40 VTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNI 104
            |.:.:..:|..||:||||||||.|:.|.:.:.::|.:.|||:||||||||:|:|.|:|.|||:
  Rat   178 VQKILDRVLSTYDVRLRPNFGGAPVPVSISIYVSSIEQISEINMDYTITMFLHQTWKDTRLAY-- 240

  Fly   105 FGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMR 169
               |..:.|       |||.....||:||||.:|.|.|::|:||||..|::.:|..||.|.||:|
  Rat   241 ---YETNLN-------LTLDYRMHEKLWVPDCYFVNSKDAFVHDVTAENRVFQLHPDGTVQYGIR 295

  Fly   170 FTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK-PTPVRGVEDAELPQFTIIGYETND 233
            .|||.||.:||..:|:|.|:|.:|:|||||||.|:|:.|: ...:...::..:||:|.:|.....
  Rat   296 LTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIHITDELHIPQYTYLGRTITS 360

  Fly   234 RKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 298
            ::....||.|.||.:.|::||.:..::.|.|.|::|..:|||:|||:|:.:::|||.:|:|::|.
  Rat   361 KEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYGSSAARVTIGLTSILV 425

  Fly   299 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGK 363
            :|||.:.:|..||.||.:||||||:::|..|||.:||||..:||.::.:..::..::.::  |.:
  Rat   426 LTTIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLLEYVYINYLFFSQAPRRNHRRCRK--PRR 488

  Fly   364 IGKSERSE---TCSTTEDIIELQD---VRMSPIPSLRRGTYNATLDSIGT 407
            :....|.:   ..:..:.:|.::|   .|..|:|......:.|:.:|:|:
  Rat   489 VVARYRYQEVVVANVQDGLINVEDRVEDRAGPLPDSPMQAHLASQESLGS 538

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	145/375 (39%)
Gabrq	XP_063136356.1	None