Protein Alignment Lcch3 and gabrd

DIOPT Version :10

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_700099.5
• Gene: gabrd / 571422
• ZFINID: ZDB-GENE-081105-170
• Length: 459
• Species: Danio rerio
• Alignment Length: 465
• Identity: 177/465 - (38%)
• Similarity: 257/465 - (55%)
• Gaps: 63/465 - (13%)

  Fly    44 ISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQY 108
            :.::::||....||..||.|::|.|.:.:||.|.|||.||:||:|::|.|.|||:||::|
Zfish    45 LDDLMKGYARNFRPGIGGPPVNVAMAIEVASIDHISEANMEYTMTVFLRQSWRDDRLSYN----- 104

  Fly   109 FDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTT 173
                   ..:..|.|...|.:|:|:||||..|.|:::.||||..|||:||..||.:.|..|.|:|
Zfish   105 -------HTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSSRITST 162

  Fly   174 LACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTP--VRGVEDAELPQFTIIGYE-TNDRK 235
            :||.|||..||:|.|.|.:::|||||:..|:|.:|..:.  :.|::..||.||||..|. ..:..
Zfish   163 VACDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWSESQKLIHGLDKLELSQFTITDYRFVTEMM 227

  Fly   236 ERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
            ...:.|.:.||||.|:|:||.|.::.|:|:||||:|.:|||||||:..|..|||:||||||||||
Zfish   228 NFKSAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVSLGITTVLTMT 292

  Fly   301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTY-WGKRAKKKIKKVKECCPGKI 364
            |:....||||||.|.:||:|:|..:|:|||||||:|||..:|.. :.|:.|.|:|
Zfish   293 TLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYAFAHYNADYSKKEKAKVK---------- 347

  Fly   365 GKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTG- 428
                   |....|.::             :.|.....|.|:....||.|.. .|.|.:|::...
Zfish   348 -------TNKNAESMV-------------KNGKQAMVLFSLSVAGMNQGLL-ISNRQSRSHRASD 391

  Fly   429 --------HSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAF 485
                    |.:...|:    :|..|   |.|..:...|....|..|.:.||.|:|.:||.:|...
Zfish   392 AAAAAADPHEETETRS----ATSRR---AQKESSEEKKCCKCKPIDADTIDIYARAVFPFTFAVV 449

  Fly   486 NLGYWLFYIL 495
            |:.||:.|.:
Zfish   450 NVIYWVAYTM 459

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	176/461 (38%)
gabrd	XP_700099.5	LIC	45..457	CDD:455710	176/461 (38%)
		LGIC_ECD	64..247	CDD:475126	81/194 (42%)