Protein Alignment Lcch3 and gabrb3

DIOPT Version :10

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_021327485.1
• Gene: gabrb3 / 566922
• ZFINID: ZDB-GENE-101102-2
• Length: 532
• Species: Danio rerio
• Alignment Length: 498
• Identity: 238/498 - (47%)
• Similarity: 311/498 - (62%)
• Gaps: 70/498 - (14%)

  Fly    35 GRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDER 99
            |.:..|.:|:..:|:||||||||:|||.|:.|||.:.:||.|.:||||||||:|||..|||||:|
Zfish    66 GNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKR 130

  Fly   100 LAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAV 164
            ||:.            ||...|||....|:::|||||:|.|||.||:|.||.:|:::||..||.|
Zfish   131 LAYT------------GIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTV 183

  Fly   165 TYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK--PTPVRGVEDAELPQFTII 227
            .||:|.|||.||||||..||||.||||:||||||||..|:..|||  .|.|.||...|||||:|:
Zfish   184 LYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSIV 248

  Fly   228 GYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 292
            .|:...|....:||.|.||||||||:||||||:.|||:|||||.:|||||||||::|::||||||
Zfish   249 DYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 313

  Fly   293 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGK--RAKKKI-- 353
            ||||||||||:|.:|.:||:|.||||||:||:.||||||.||||||.|||.::|:  :.:||:
Zfish   314 ITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQMQKKLAE 378

  Fly   354 ---------------KKVKE---CCPGKIGKSERSE--------------TCSTTEDIIELQDVR 386
                           |.|:|   |.|..:.:|.:.:              ..:|.|...|:....
Zfish   379 KAEKANNDRNKYDGNKSVQEGGNCKPSSVKQSNQVQGHRHSRGVDSQGNILLTTLEIHNEVAGNE 443

  Fly   387 MSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALK 451
            ::...|..|.:.:...|:.|.:             .|...|....:.|.||   |.:||    |:
Zfish   444 ITTSVSEARNSTSMVFDNSGIQ-------------YRKQSTARHSMDRNAQ---SKKPR----LR 488

  Fly   452 RGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYI 494
            |.:|.:|..||.:.|||.||::||:|||..|..|||.|||:|:
Zfish   489 RRSSQLKIKIPDLTDVNAIDRWSRIIFPAVFSLFNLIYWLYYV 531

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	237/495 (48%)
gabrb3	XP_021327485.1	LIC	61..530	CDD:273305	237/495 (48%)