Protein Alignment Lcch3 and gabrb4

DIOPT Version :10

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_005173931.1
• Gene: gabrb4 / 566514
• ZFINID: ZDB-GENE-070424-211
• Length: 512
• Species: Danio rerio
• Alignment Length: 533
• Identity: 247/533 - (46%)
• Similarity: 319/533 - (59%)
• Gaps: 80/533 - (15%)

  Fly    11 CGLFFFLLGAQLQLIRCIRKDVLAGR--LENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIA 73
            ||:...|  |.|..: |..:....|.  :.....|:..:|:||||||||:|||.|:.|||.:.||
Zfish    10 CGIVSAL--AALSFV-CFAQSSSTGSTGISVAKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIA 71

  Fly    74 SFDAISEVNMDYTITMYLNQYWRDERLAF-----NIFGQYFDDENDDGISDVLTLSGDFAEKIWV 133
            |.|:|||||||||||||..|.|||:|||:     |                 |||....|:::|:
Zfish    72 SIDSISEVNMDYTITMYFQQSWRDKRLAYAEMALN-----------------LTLDNRVADQLWL 119

  Fly   134 PDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYG 198
            |||:|.|||.||||.||.:|:::||..||.|.||:|.|||.||||||..||||.||||:||||||
Zfish   120 PDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYG 184

  Fly   199 YTVSDVVMYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVF 261
            ||..|:|.:|:  ...|.||:..|||||:|:......|:.|..||.|.||||||:::||||||:.
Zfish   185 YTTDDIVFFWQGGDNAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFIL 249

  Fly   262 QTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 326
            |||:|||||.:|||||||||::|::||||||:|||||||||:|.:|.:||:|.||||||:||:.|
Zfish   250 QTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGC 314

  Fly   327 FVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIP 391
            |||||.||||||.|||.::| |..::.||:.|    ::.|: .:|.....|..:..||...:|..
Zfish   315 FVFVFLALLEYAFVNYVFFG-RGPQQQKKINE----RLNKA-NNERPRYEEKRLREQDSISAPFQ 373

  Fly   392 S-------LRRGTY-----NATLDSIG-----TETMNLGKFP----PSFRITRNY---------- 425
            |       .||..|     ...:|:.|     |..||....|    .|...:||.
Zfish   374 SNTLRSYTQRRNLYLEEQRKVGVDAYGNILLTTLEMNNEVMPSDVGSSVSDSRNSVMSFDSSGVQ 438

  Fly   426 ---------GTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDKYSRMIFPIS 481
                     |..|..|.|.|.|.     |....|:|.:|.:|..||.:.||:.|||:||:||||:
Zfish   439 FRKPMGSRDGFSHHSLDRSAMRS-----RANCRLRRRSSKLKLKIPNLTDVSTIDKWSRIIFPIT 498

  Fly   482 FLAFNLGYWLFYI 494
            |..|||.|||:|:
Zfish   499 FGFFNLIYWLYYV 511

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	244/526 (46%)
gabrb4	XP_005173931.1	LIC	13..510	CDD:273305	244/527 (46%)