DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcch3 and CG6927

DIOPT Version :10

Sequence 1:NP_996469.1 Gene:Lcch3 / 32554 FlyBaseID:FBgn0010240 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster


Alignment Length:509 Identity:127/509 - (24%)
Similarity:224/509 - (44%) Gaps:82/509 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TQTISNILQG--YDIRLRPNFGGE-----PLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDE 98
            ||.:..:..|  ||...||....|     |:.|.|...|.....:...::.:.|...|...:.|.
  Fly    37 TQLLDRLTHGCRYDRLERPITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDP 101

  Fly    99 RLAFN---------IFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 154
            ||.|.         |.|:                 ......:|:|..|.||:::|.:..:||::.
  Fly   102 RLNFRNVSPKRRQPILGE-----------------EHLRNSLWMPHIFLANERDSSILGLTEKDI 149

  Fly   155 LVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYW---KPTPVRGV 216
            |..:..||.|....|...||.|.::|..:|.|.|:|:..:||:.|..|::|::|   :|....|.
  Fly   150 LTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHWEQKRPITYDGA 214

  Fly   217 EDAELPQF---------TIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVM 272
              ..|.:|         |:|..:.:|.:.....|.|..||.:..|.|.:|:::...:|||:|||.
  Fly   215 --LHLTEFVLQRSWSNETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVA 277

  Fly   273 LSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 337
            :||||||:..:....|:.||.:|:||..|:::....:||::||:|..:::.:.|.:|:|.:::|:
  Fly   278 ISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEF 342

  Fly   338 AAVNYTYWGKRAKKKIKKVKE-------CCPGKIGKSERSETCS-------TTEDIIELQDVRMS 388
            |.|| |.|.::....:||:..       ..|..:.:...:.:.|       .|.|...|.....:
  Fly   343 AFVN-TIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFN 406

  Fly   389 -------PIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRM 446
                   ||.:::.|   ..||...|..: :.|...:| :...:|:..|.....|....|:...:
  Fly   407 NYLTVNLPITTIKEG---QVLDQQRTSRV-VQKMDVNF-VESAFGSMGSAQSTGAISAASSSQTL 466

  Fly   447 LHALKRGASAIK--------ATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLF 492
            .:..:..::..:        .|:...:....||..:|.:||:|||.|||.:|.|
  Fly   467 TNNNRTESAGHQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWTF 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcch3NP_996469.1 LIC 15..493 CDD:273305 127/509 (25%)
CG6927NP_572194.1 LIC 3..520 CDD:455710 126/507 (25%)

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