DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcch3 and glra1

DIOPT Version :10

Sequence 1:NP_996469.1 Gene:Lcch3 / 32554 FlyBaseID:FBgn0010240 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_021336638.1 Gene:glra1 / 30676 ZFINID:ZDB-GENE-991117-1 Length:457 Species:Danio rerio


Alignment Length:514 Identity:182/514 - (35%)
Similarity:266/514 - (51%) Gaps:112/514 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFFFLLGAQLQLIRCIRK-----------DVLAGRLENVTQTISNILQGYDIRLRPNF------- 59
            :.||.|.|..|  ...||           |.|.|:           :.|||.|:||||       
Zfish    12 IVFFSLAASQQ--AAARKAASPMPPSEFLDKLMGK-----------VSGYDARIRPNFKDPQGSK 63

  Fly    60 ------GGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGIS 118
                  .|.|::|..::.|.||.:|:|..|||.:.::|.|.|.|.|||::   :|.||.      
Zfish    64 SDGTHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYS---EYPDDS------ 119

  Fly   119 DVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYY 183
              |.|.....:.||.||.||||:|.:..|:||..|||:|:..:|.|.|.:|.|..|||.|||..:
Zfish   120 --LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNF 182

  Fly   184 PLDSQNCTVEIESYGYTVSDVVMYW-KPTPVRGVEDAELPQFTIIGYETNDRK---ERLATGVYQ 244
            |:|.|.|.:::||:|||::|::..| :...|:..:...||||.:  .|..|.:   :...||.:.
Zfish   183 PMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFIL--KEEKDLRYCTKHYNTGKFT 245

  Fly   245 RLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSS 309
            .:...|.|:|.:||::.|.|:||:|||:|||||||||.:|..|||.|||||||||||.|:|.|:|
Zfish   246 CIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRAS 310

  Fly   310 LPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIGKSERSETCS 374
            ||::||||||||::.:|.:|||:|||||||||:.   .|..|::.:                   
Zfish   311 LPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFI---ARQHKELLR------------------- 353

  Fly   375 TTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRG 439
                              .:|...:...|..|.     |:|  ||..   ||.|.:.|  :|:.|
Zfish   354 ------------------FQRRRRHLKEDEAGD-----GRF--SFAA---YGMGPACL--QAKDG 388

  Fly   440 ISTRPRMLHALKRGASAIKATIPKIKDVNI-----IDKYSRMIFPISFLAFNLGYWLFY 493
            ::.:....:| ....:..:.|:.:::.:.|     ||..||:.||:.||.||:.||:.|
Zfish   389 MAIKGNNNNA-PTSTNPPEKTVEEMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITY 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcch3NP_996469.1 LIC 15..493 CDD:273305 181/510 (35%)
glra1XP_021336638.1 LIC 7..446 CDD:273305 181/512 (35%)

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