DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcch3 and exp-1

DIOPT Version :10

Sequence 1:NP_996469.1 Gene:Lcch3 / 32554 FlyBaseID:FBgn0010240 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_495229.3 Gene:exp-1 / 186801 WormBaseID:WBGene00001373 Length:539 Species:Caenorhabditis elegans


Alignment Length:464 Identity:134/464 - (28%)
Similarity:210/464 - (45%) Gaps:80/464 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YDIRLRP-NFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDEND 114
            ||.|..| |..||..:|.:.:.:::..|:|||.|||.:.::..:.|||.||.::  .:.|.::.:
 Worm   111 YDHRQVPENEKGEATYVEVSVVVSNIRAVSEVTMDYALELFYRESWRDPRLQYD--RKLFKNKTE 173

  Fly   115 DGISDVLTLSGDFAEKIWVPDTFFAN---DKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLAC 176
                  |.|...:...:|.||||..|   .||...:.::.|: |:||...|.:.|..|.:....|
 Worm   174 ------LALHESYTNFLWFPDTFVPNAIASKNPQRNSISHRS-LLRLDETGKLLYSRRISLVCEC 231

  Fly   177 MMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVEDA------ELPQFTIIGYETNDRK 235
            .|||..:|.|.|.|.:.|||||||...||..|.    :|...|      .||.|||.......:.
 Worm   232 TMDLTLFPFDKQLCKLGIESYGYTADHVVYKWS----KGARTALELKKIRLPDFTIQEAYVTSQM 292

  Fly   236 ERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 300
            |..|||.|.||.:.|...|:.|:...|..:||..:|:.||||.|:..|.....:   |:.:|.:|
 Worm   293 ESYATGNYSRLYVCFVFSRSSGFCFLQLIIPSTAVVITSWVSLWMETETEFQDM---ISIILAIT 354

  Fly   301 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKVKECCPGKIG 365
            .:.......:||:||:||:||||.:||:.||.:|::.|.|.|      .::||....:.     |
 Worm   355 FLIFSYNEMMPRVSYIKAMDIYLGVCFMIVFLSLIKLALVKY------MRQKIMLTSDS-----G 408

  Fly   366 KSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHS 430
            .|.|                .||.:.:.:|      |.:..|..||.          ||.|.|..
 Worm   409 NSLR----------------EMSQMSTRQR------LRARKTSNMNF----------RNNGGGSI 441

  Fly   431 QLRRRAQRGIST---RPRMLHALKRGASAI-KATIPKIKDVNIIDK-------YSRMIFPISFLA 484
            .:....|:.::.   ..:|.:...:.|:.. |:.:..:.::.|..:       .|:|:|...|:.
 Worm   442 PINEEHQQMLTVPNGEDKMANGDDKEANNNGKSHLSDMLEIRITQRTMHRFHWISQMLFFFGFVI 506

  Fly   485 FNLGYWLFY 493
            |.|.|:|.|
 Worm   507 FCLFYFLIY 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcch3NP_996469.1 LIC 15..493 CDD:273305 133/462 (29%)
exp-1NP_495229.3 LIC 103..515 CDD:455710 133/462 (29%)

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