DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcch3 and avr-15

DIOPT Version :10

Sequence 1:NP_996469.1 Gene:Lcch3 / 32554 FlyBaseID:FBgn0010240 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001024076.1 Gene:avr-15 / 179834 WormBaseID:WBGene00000233 Length:657 Species:Caenorhabditis elegans


Alignment Length:476 Identity:146/476 - (30%)
Similarity:233/476 - (48%) Gaps:102/476 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TQTISNIL-QGYDIRLRP-----NFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDER 99
            |:.:.::| :|||.|:||     ...|.|:.|.:::.:.|...|..|||:|::.:...:.|.|:|
 Worm   252 TEILEHLLTRGYDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKR 316

  Fly   100 LAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAV 164
            |:|.:.|        |...|.|.|:.  .::||:||:||.|:|.::.|.:.:.|.|:|:..||.:
 Worm   317 LSFGVKG--------DAQPDFLILTA--GQEIWMPDSFFQNEKQAYKHMIDKPNVLIRVHKDGTI 371

  Fly   165 TYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK---PTPVRGVEDAELPQFTI 226
            .|.:|.:..|:|.|.|.|||:|.|.|.:::.||.||..|:...||   |..::....:.||.|.:
 Worm   372 LYSVRISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSSSLPSFQL 436

  Fly   227 IGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 291
            ....|.....:..||.|..|....:|:|...|::.|.|:||.::|::|||||||:..|..|||.|
 Worm   437 TNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTL 501

  Fly   292 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGKRAKKKIKKV 356
            |:||:|||||.|:|:.:.||.::|:||||:::..|..|:|.||||:|.|.|....:.|.|:.:..
 Worm   502 GVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALLEFAWVTYIANKQDANKRARTE 566

  Fly   357 KE--------------CCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRGTYNATLDSIGT 407
            :|              ..|.::.:.||           |:..|||:     ||.| |:....|.|
 Worm   567 REKAELPFLQNSHNDVWVPREVAEQER-----------EVMTVRMN-----RRQT-NSVWKWIKT 614

  Fly   408 ETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGISTRPRMLHALKRGASAIKATIPKIKDVNIIDK 472
            :|                     :...:::|.                               |.
 Worm   615 KT---------------------EWNDKSKRA-------------------------------DL 627

  Fly   473 YSRMIFPISFLAFNLGYWLFY 493
            .||::||:.||.||:.||..|
 Worm   628 ISRVMFPVLFLTFNISYWTHY 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcch3NP_996469.1 LIC 15..493 CDD:273305 145/474 (31%)
avr-15NP_001024076.1 LIC 253..648 CDD:455710 144/473 (30%)

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