Protein Alignment Lcch3 and gabrb1

DIOPT Version :10

• Sequence 1: NP_996469.1
• Gene: Lcch3 / 32554
• FlyBaseID: FBgn0010240
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: XP_012811146.2
• Gene: gabrb1 / 100489344
• XenbaseID: XB-GENE-6049110
• Length: 477
• Species: Xenopus tropicalis
• Alignment Length: 497
• Identity: 238/497 - (47%)
• Similarity: 319/497 - (64%)
• Gaps: 42/497 - (8%)

  Fly    12 GLFFFL-LGAQLQLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASF 75
            |.|..| |...:.::.|.:.......:..|.:|:..:|:||||||||:|||..:.|||.:.:||.
 Frog     8 GYFGMLSLPVMIAMVCCAQSVNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPSVEVGMRIDVASI 72

  Fly    76 DAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFAN 140
            |.:||||||||:|||..|.|||:||:::            ||...|||....|:::|||||:|.|
 Frog    73 DMVSEVNMDYTLTMYFQQSWRDKRLSYS------------GIPLNLTLDNRVADQLWVPDTYFLN 125

  Fly   141 DKNSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 205
            ||.||:|.||.:|:::||..||.|.||:|.|||.||||||..||||.||||:||||||||..|:.
 Frog   126 DKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIK 190

  Fly   206 MYWK--PTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSI 268
            .||.  ...:.|||..|||||:||.|:...|....:||.|.||||||:|:||||||:.|||:||.
 Frog   191 FYWNGGDKAITGVEKIELPQFSIIDYKMVSRNVIFSTGAYPRLSLSFRLKRNIGYFILQTYMPST 255

  Fly   269 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 333
            ||.:|||||||||::|::||||||||||||||||||.:|.:||:|.|||||||||:.||||||.|
 Frog   256 LITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLA 320

  Fly   334 LLEYAAVNYTYWGK--RAKKKIKKVKECCPGKIGKSERSETCSTTEDIIELQDVRMSPIPSLRRG 396
            |||||.|||.::||  :.:||             .:|::|..:..:..:|:..|::....::...
 Frog   321 LLEYAFVNYIFFGKGPQLQKK-------------AAEKAEKANNEKTKLEMNKVQVDAHGNILLT 372

  Fly   397 TYNATLDSIGTETMNLGKFPPSFRITR-NYGTGHSQLRRR-AQRGISTRP----RMLH---ALKR 452
            |.....:..|:|.:.....|   |.|. :|.:...|.|:. |.|.:.:|.    .::|   .|:|
 Frog   373 TLELRNEVSGSEVLTSISDP---RATMFSYDSASIQYRKPVANRDMYSRSTLDRHVVHKKGRLRR 434

  Fly   453 GASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYI 494
            .||.||..||.:.|||.||::||||||::|..||:.|||:||
 Frog   435 RASQIKIKIPDLTDVNGIDRWSRMIFPVAFAFFNVVYWLYYI 476

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lcch3	NP_996469.1	LIC	15..493	CDD:273305	234/491 (48%)
gabrb1	XP_012811146.2	LIC	9..475	CDD:273305	235/493 (48%)