DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and CLB6

DIOPT Version :10

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_011623.3 Gene:CLB6 / 853003 SGDID:S000003341 Length:380 Species:Saccharomyces cerevisiae


Alignment Length:304 Identity:74/304 - (24%)
Similarity:135/304 - (44%) Gaps:58/304 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 TSHCQRLDERLTT--TADP--PAT------------DNVNTAIGDPTL---YSDRCLENFLKVE- 160
            ::|.::..:|..:  :.||  |.|            |::.  :.||.:   |:|....:..:.| 
Yeast    71 STHLEKTRKRQLSNDSTDPIEPKTVKKIKCHQWKNLDSIE--MDDPFMVAEYTDSIFSHLYEKEI 133

  Fly   161 ---EKHHKIPDTYFSIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKT 222
               ..|:.:.||.....  :...||.::.:|::||..:.:|..|.:.||:|.:|||||...|:..
Yeast   134 QMLPTHNYLMDTQSPYH--LKSSMRALLIDWLVEVHEKFHCLPETLFLAINLLDRFLSQNVVKLN 196

  Fly   223 QLQILAAACLLLASKLREPSCRALSVDLLVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDF 287
            :||:|...||.:|.|..|  .:...:......||.:...:.:.|.||:|||.||:::|...||:|
Yeast   197 KLQLLCITCLFIACKFEE--VKLPKITNFAYVTDGAATVEGIRKAELFVLSSLGYNISLPNPLNF 259

  Fly   288 LELLMMRLPIGSKNFPDINIGKVRGHAQAFISLAAKEHKFAKFSASTIAASS--IAASM--NGLK 348
            :..:       ||  .|....:.|..|:..:..:...:||.....|.:||.|  ||..:  ...|
Yeast   260 IRRI-------SK--ADNYCIETRNMAKFIMEYSICCNKFIHLKPSYLAAMSMYIARKIKNENSK 315

  Fly   349 W-----HLRSGHNLH-------FLLSLMTDL----TSVEQAQVR 376
            |     |...|.::.       |:..|:.|:    |:::..:::
Yeast   316 WDETFIHYSGGIDIESDPAFKDFISELVEDIAVPDTNLDSLRLK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 CYCLIN_SF 144..278 CDD:477360 42/140 (30%)
CYCLIN_CCND_rpt2 283..387 CDD:410220 24/114 (21%)
CLB6NP_011623.3 COG5024 1..380 CDD:227357 74/304 (24%)

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