Protein Alignment CycD and CYCD4;2

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_196606.3
• Gene: CYCD4;2 / 830908
• AraportID: AT5G10440
• Length: 298
• Species: Arabidopsis thaliana
• Alignment Length: 280
• Identity: 73/280 - (26%)
• Similarity: 123/280 - (43%)
• Gaps: 58/280 - (20%)

  Fly   122 LDERLTTTADPPATDNVNT----AIGDPTLYSDRCLENFLKVEEKHHKIPDTYFSIQK--DITPP 180
            ::..|.:..|...:::|:|    .:|.| |.|:..:...:: :|:.|...|.|....:  |:...
plant     5 MEPNLVSNFDDEKSNSVDTRSIFQMGFP-LESEEIVREMIE-KERQHSPRDDYLKRLRNGDLDFN 67

  Fly   181 MRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLS---SKSVRKTQLQILAAACLLLASKLRE-- 240
            :|.....|:.:.|.|.......:.||:||:|||||   ..|.:...:|:||.|||.||:|:.|
plant    68 VRIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETN 132

  Fly   241 -PSCRALSVDL-LVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFP 303
             |....|.|.. :.|:...|:.     :.||.||:.|.|.|.:|||..::...
plant   133 VPELMQLQVGAPMFVFEAKSVQ-----RMELLVLNVLRWRLRAVTPCSYVRYF------------ 180

  Fly   304 DINIGKVRGHAQ-----------AFISLAAKEHKFAKFSASTIAASSIAASMNGLKWHLRSGHNL 357
               :.|:.|:.|           ..|:...|...|.:|.||.||| ::|.|::|          .
plant   181 ---LSKINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAA-AVALSVSG----------E 231

  Fly   358 HF-LLSLMTDLTSVEQAQVR 376
            || ..|..:..:|:|:.:|:
plant   232 HFDKFSFSSSFSSLEKERVK 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	42/142 (30%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	23/106 (22%)
CYCD4;2	NP_196606.3	CYCLIN_AtCycD-like_rpt1	68..166	CDD:410246	34/102 (33%)
		CYCLIN_AtCycD-like_rpt2	171..257	CDD:410247	24/107 (22%)