Protein Alignment CycD and ccnp

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001038424.1
• Gene: ccnp / 561391
• ZFINID: ZDB-GENE-030131-5453
• Length: 398
• Species: Danio rerio
• Alignment Length: 221
• Identity: 57/221 - (25%)
• Similarity: 97/221 - (43%)
• Gaps: 29/221 - (13%)

  Fly   173 IQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASK 237
            :.|..|...|.|:.:|:::|.......||.:.|.::.::|.|....|..:.||:|...||.||:|
Zfish   155 LPKPFTDTTRAILVDWLIQVHEVFQFSEETLYLTVHLLNRALRLIKVSISGLQLLGVVCLFLAAK 219

  Fly   238 LREPSCRALSVDLLVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNF 302
            ..|  |....|..|....:|:..|..|::.|..||..|.:||....||.|| |:...:...|
Zfish   220 REE--CLLPEVSELCYLMENAYSKKQLLRMERRVLIGLKFDLYHCPPLHFL-LISASIARCS--- 278

  Fly   303 PDINIGKVRGHAQAFISLAAKEHKFAKFSASTIAASSI----------AASMNGLKWHLRSGHNL 357
                 .||...|:..:.|:..|.:...:..:.:|.:::          ||....:.|.:.|  ::
Zfish   279 -----DKVVWMARYLLELSLLEGRCVVYLPAQLAGAALRLARKILQEAAAPEAEMAWCIAS--SI 336

  Fly   358 HF-----LLSLMTDLT-SVEQAQVRD 377
            |.     |||:|..:. :..:||.|:
Zfish   337 HIGSEAVLLSIMQIMAIAAARAQTRE 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	31/104 (30%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	24/111 (22%)
ccnp	NP_001038424.1	CYCLIN_CNTD2	164..259	CDD:410245	29/96 (30%)
		Cyclin_C	264..384	CDD:397230	24/110 (22%)