Protein Alignment CycD and Ccno

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001386709.1
• Gene: Ccno / 499528
• RGDID: 1565217
• Length: 352
• Species: Rattus norvegicus
• Alignment Length: 358
• Identity: 81/358 - (22%)
• Similarity: 136/358 - (37%)
• Gaps: 72/358 - (20%)

  Fly    88 PPPPPPPPPPTAT------QSIQS------YPRYISQEP--PTSHCQ--------RLDERLTTT- 129
            |.|..|..|.:..      |::::      .||...:||  |.:.|.        .|.|..:::
  Rat     4 PCPASPASPASGAGRQDNHQNLRAPVKKSRRPRLRRKEPLRPLNACSLPGDSGVCDLFESPSSSS 68

  Fly   130 --ADPPATDNVN------------TAIGDPTL--YSDRCLENFLKVEEK-HHKIPDTYFSIQKDI 177
              ||.||...|.            ||:...|.  |...|.: |.|.:|. .|  |....:.|..:
  Rat    69 DGADSPAVSAVRDCSSLLSSAQPLTALDLQTFREYGQSCYD-FRKAQENLFH--PRESLARQPQV 130

  Fly   178 TPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPS 242
            |...|..:..|:::|..:.....|.:.|.:|.:||||.:..|.....|:|...|||:|
  Rat   131 TAESRCKLLSWLLQVHRQFGLSFESLCLTVNTLDRFLLTTPVAADCFQLLGVTCLLIA------- 188

  Fly   243 CRALSV-----DLLVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLE-LLMMRLPIGSKN 301
            |:.:.|     ..|:.....:..:..|...|..||.:|.:.|.:.|...||| ....|:..|...
  Rat   189 CKQVEVHPPRMKQLLALCGGAFSRQQLCNLECIVLHKLHFSLGAPTINFFLEHFTHSRVEAGQVE 253

  Fly   302 FPDINIGKVRGHAQAFISLAAKEHKFAKFSASTIAASSIAASMNGLKWHLRSGHNLHFLLSLMTD 366
            ..:....:......|.:||.  ::.|..::.|.:|...:|.:...|: |.|           :.|
  Rat   254 VTEALAAQTLARGVAELSLT--DYAFTTYTPSLLAICCLALADRMLR-HQR-----------LMD 304

  Fly   367 LTSVE--QAQVRDCMLHMEDIFKEHSRNLEPFL 397
            |...|  :|.:.||:..::.:...:|.:|...|
  Rat   305 LRLGEHPEATLLDCLGKLQKLVSINSSSLTHML 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	35/141 (25%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	22/106 (21%)
Ccno	NP_001386709.1	CYCLIN_CCNO_rpt1	134..226	CDD:410239	24/98 (24%)
		CYCLIN_CCNO_rpt2	233..328	CDD:410311	22/108 (20%)