Protein Alignment CycD and ccnf

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: XP_012825809.1
• Gene: ccnf / 496496
• XenbaseID: XB-GENE-963729
• Length: 764
• Species: Xenopus tropicalis
• Alignment Length: 299
• Identity: 59/299 - (19%)
• Similarity: 125/299 - (41%)
• Gaps: 60/299 - (20%)

  Fly   171 FSIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLA 235
            |:.||.:...||.|:.:|::||...::.....:.:.:..:||:|..:||.:.:||::..||:::.
 Frog   305 FTTQKGMNDTMRYILIDWLVEVATMKDFSSLCLHMTVGLVDRYLKLRSVPRAKLQLVGIACMVIC 369

  Fly   236 SKLREPSCRALSVDLLVV-----YTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRL 295
            :       |.:|.::|.:     .|||:...:||::....::|.|...:...|.:|:.::|...:
 Frog   370 T-------RFISKEILTIREAVWLTDNTYKYEDLVRMMGEIISALEGKIRMPTVVDYKDVLSHLI 427

  Fly   296 PIGSKNFPDINIGKVRGHAQAFIS-LAAKEHKFAKFSASTIAASSIAAS----MNGLKWHLRSGH 355
            |:.....          |..::|| |:....:.:.:|.:.:||.::..:    .....|..:...
 Frog   428 PLDRSTL----------HLCSYISELSLLYTELSTYSPAQLAAGALLLARILHKQARPWPAQLAE 482

  Fly   356 NLHFLLSLMTDLTSVEQAQVRDCMLHMEDIFKEHSRNLEPFLVNIDPKEMSTLYYKRRF------ 414
            ...|.|..:|...         .:||.:....:..:         |.:::|....|:||
 Frog   483 TTGFTLEHLTPCV---------VLLHKKCFHDDAPK---------DYRQVSLTAVKQRFQDDLYD 529

  Fly   415 ------QIHQSQHLSQISIRPLPLPKAPAEC---VEQHQ 444
                  |:....||.::...|....::||.|   .:.||
 Frog   530 QISKEKQVMDHSHLCELLGVPCRDSESPASCPNAADFHQ 568

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	28/111 (25%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	17/108 (16%)
ccnf	XP_012825809.1	F-box_FBXO1	30..81	CDD:438854
		SLR repeat	87..111	CDD:276807
		CYCLIN_CCNF_rpt1	313..407	CDD:410225	24/100 (24%)
		CYCLIN_CCNF_rpt2	435..547	CDD:410226	21/129 (16%)