Protein Alignment CycD and Ccnjl

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001032862.2
• Gene: Ccnjl / 303059
• RGDID: 1561384
• Length: 387
• Species: Rattus norvegicus
• Alignment Length: 306
• Identity: 68/306 - (22%)
• Similarity: 122/306 - (39%)
• Gaps: 71/306 - (23%)

  Fly   205 LALNYMDRFLSSKSVRKT-QLQILAAACLLLASKLREPSCRALSVDLL----VVYTDN-SIYKDD 263
            ||:..:|.|:...:|..: ||..:|.:|||||||..:...|...:|.:    ::.:.| |:.|.:
  Rat    61 LAIYLLDHFMDQYNVTTSKQLYTVAVSCLLLASKFEDREDRVPKLDQINSTRILSSHNFSLTKKE 125

  Fly   264 LIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKN-----FPDINIGK----VRGHAQAFIS 319
            |:..||.:|....|||...||..||:..:: ..|..|:     :|...:.|    ::.:|..|:.
  Rat   126 LLTTELLLLEAFSWDLCLPTPAHFLDYYLL-ASISQKDHHCHTWPTTCLRKTKECLKEYAHYFLE 189

  Fly   320 LAAKEHKFAKFSASTIAASSIAASMNGLK----W----HLRSGHNLHFLLSLMTDLTSVEQAQVR 376
            :..::|.|.||..|.:||:.:.||...|:    |    ...|.::|..|.:.:..|.......::
  Rat   190 VTLQDHIFYKFQPSVVAAACVGASRICLQLSPYWTRDLQRVSNYSLEHLSTCIEILLVAYDNVLK 254

  Fly   377 DCM-LHMEDIFKEHSRNLEPFLVNIDPKEMST--------------------LYYKRRFQIHQS- 419
            |.: :..:.:....|.:..|..|...|....:                    |.|:...|.|:|
  Rat   255 DAVAVKSQALAMVPSSSSAPTQVLFQPPTYPSLSQPPPTTLAQFQSPAQDLCLAYRDSLQAHRSG 319

  Fly   420 ---------------QHLSQISIRPLPLPKA----------PAECV 440
                           ..|..:.:.|:|:|.:          |..|:
  Rat   320 TLLSGDTGPSLHTPYPTLQPLDMCPVPVPASLSMQMAIAAEPRHCL 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	24/78 (31%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	26/121 (21%)
Ccnjl	NP_001032862.2	CYCLIN_CCNJ-like_rpt1	32..120	CDD:410231	18/58 (31%)
		CYCLIN_CCNJ-like_rpt2	144..245	CDD:410232	24/101 (24%)