DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and Ccng2

DIOPT Version :10

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001099195.1 Gene:Ccng2 / 29157 RGDID:1305002 Length:344 Species:Rattus norvegicus


Alignment Length:302 Identity:63/302 - (20%)
Similarity:111/302 - (36%) Gaps:71/302 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 EVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRALSVDLLVVYTDNSIYKDDLI 265
            |..:||:|.:||||:...|:...|..:...|.|||::|.|..|.......::..:.......|:.
  Rat    75 ETFVLAVNILDRFLALMKVKPKHLSCIGVCCFLLAARLAEEECDIPPTHDVIRISQCKCTASDIK 139

  Fly   266 KWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDINIGKVRGHAQAF---------ISLA 321
            :.|..:..:|.::|.:.|.|:||.|.                     ||..|         :||.
  Rat   140 RMEKIISEKLHYELEATTALNFLHLY---------------------HAIVFCHSPERKEVLSLD 183

  Fly   322 AKEHK---------FAKFSASTIAASSIAASMNGLKWHLRSGHNLHFLLSLMTDLTSVE------ 371
            ..|.:         |:|...|.:|...:...:..:|    |...|..||.:...|...:      
  Rat   184 KLEAQLKACNCRLVFSKAKPSVLALCLLNLEIETIK----SVELLEILLLVKKHLKISDTEFFYW 244

  Fly   372 QAQVRDCMLHMEDIFKEHSRNLEPFLVNIDPKEMSTLYYKRRFQIHQSQHLSQISIRPLP-LPKA 435
            :..|..|:       .|:|   .|.....|.|::..:..:|   ..||.|.|..|:..|| :|: 
  Rat   245 RELVSKCL-------AEYS---SPHCCKPDLKKLVWIVSRR---TAQSLHNSYYSVPELPTIPE- 295

  Fly   436 PAECVEQHQQQHNFGSAAPHRTHTCKMQAQAQAQNEIQDVTF 477
             ..|.:..:.:.:      ....:|..::.:.:....|:.||
  Rat   296 -GGCFDGSESEDS------GEDMSCGEESLSSSPPSDQECTF 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 CYCLIN_SF 144..278 CDD:477360 20/76 (26%)
CYCLIN_CCND_rpt2 283..387 CDD:410220 23/127 (18%)
Ccng2NP_001099195.1 CYCLIN_CCNG2 55..150 CDD:410287 19/74 (26%)

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