Protein Alignment CycD and Ccnj

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_766427.1
• Gene: Ccnj / 240665
• MGIID: 2443297
• Length: 379
• Species: Mus musculus
• Alignment Length: 290
• Identity: 67/290 - (23%)
• Similarity: 119/290 - (41%)
• Gaps: 44/290 - (15%)

  Fly   205 LALNYMDRFLSSKSVRKTQLQILAAACLLLASKLRE-----PSCRALS-----VDLLVVYTDNSI 259
            ||:..:|.|:....:...||.::|.:|||||||..|     |....|:     .::.:|.|
Mouse    63 LAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLT---- 123

  Fly   260 YKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMR------LPIGSKNFPDINIGKVR----GHA 314
             |..|:..||.:|....|:|...|...|:|..:..      |..|   :|.:.:.|.:    .:|
Mouse   124 -KQTLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDG---WPMVCLEKTKLYMAKYA 184

  Fly   315 QAFISLAAKEHKFAKFSASTIAASSIAASMNGLK----WHLRSGHNLHFLLSLMTDLTSVEQAQV 375
            ..|:.::.:::.|..::.|.:||:.:|:|...|:    |..|    ||.|.:...|.  :.|...
Mouse   185 DYFLEVSLQDYAFLNYAPSLVAAACVASSRIILRLSPTWPTR----LHRLTAYSWDF--LVQCIE 243

  Fly   376 RDCMLHMEDIFKEHSRNLEPFLVNIDPKEMSTLYYKRRFQIHQSQHLSQISIR-PLPLPKAPAEC 439
            |..:.|..|:.:.:.:..:....:.......|....|.....|.|:|.|.|:: ..|:.:.|:
Mouse   244 RLLLAHDNDVKEANKQRGQSAPQSTQLTVFQTAQPSRPVHFQQPQYLHQSSLQYRHPVSEQPS-- 306

  Fly   440 VEQHQQQHNFGSAAPHRTHTCKMQAQAQAQ 469
               .||..:....:.:...||....|...|
Mouse   307 ---RQQIVSTTHTSSYTLQTCPAGFQTSVQ 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	24/82 (29%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	26/117 (22%)
Ccnj	NP_766427.1	CYCLIN_CCNJ-like_rpt1	34..140	CDD:410231	24/81 (30%)
		CYCLIN_CCNJ-like_rpt2	145..245	CDD:410232	23/108 (21%)