DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and Ccno

DIOPT Version :10

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001074531.1 Gene:Ccno / 218630 MGIID:2145534 Length:352 Species:Mus musculus


Alignment Length:294 Identity:67/294 - (22%)
Similarity:113/294 - (38%) Gaps:53/294 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 ADPPATDNVN------------TAIGDPTL--YSDRCLENFLKVEEK-HHKIPDTYFSIQKDITP 179
            ||.||.....            ||:...|.  |...|.: |.|.:|. .|  |....:.|..:|.
Mouse    71 ADSPAVSAARDCSSLLNPAQPLTALDLQTFREYGQSCYD-FRKAQENLFH--PRESLARQPQVTA 132

  Fly   180 PMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCR 244
            ..|..:..|:::|..:.....|.:.|.:|.:||||.:..|.....|:|...|||:|       |:
Mouse   133 ESRCKLLSWLLQVHRQFGLSFESLCLTVNTLDRFLLTTPVAADCFQLLGVTCLLIA-------CK 190

  Fly   245 ALSV-----DLLVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLE-LLMMRLPIGSKNFP 303
            .:.|     ..|:.....:..:..|...|..||.:|.:.|.:.|...||| ....|:..|.....
Mouse   191 QVEVHPPRLKQLLALCGGAFSRQQLCNLECIVLHKLHFSLGAPTINFFLEHFTQWRMEAGQAEVT 255

  Fly   304 DINIGKVRGHAQAFISLAAKEHKFAKFSASTIAASSIAASMNGLKWH-----LRSGHNLHFLLSL 363
            :....:......|.:||.  ::.|..::.|.:|...:|.: :||..|     ||.|.:       
Mouse   256 EALEAQTLARGVAELSLT--DYAFTTYTPSLMAICCLALA-DGLLQHQHEMDLRLGEH------- 310

  Fly   364 MTDLTSVEQAQVRDCMLHMEDIFKEHSRNLEPFL 397
                   .:|.::||:..::.:...:|.:|...|
Mouse   311 -------PEATLQDCLGKLQTLVSINSSSLPRIL 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 CYCLIN_SF 144..278 CDD:477360 35/141 (25%)
CYCLIN_CCND_rpt2 283..387 CDD:410220 22/109 (20%)
CcnoNP_001074531.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40
CYCLIN_CCNO_rpt1 134..226 CDD:410239 24/98 (24%)
CYCLIN_CCNO_rpt2 233..328 CDD:410311 22/111 (20%)
Blue background indicates that the domain is not in the aligned region.

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