Protein Alignment CycD and cyd-1

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001369816.1
• Gene: cyd-1 / 174941
• WormBaseID: WBGene00000870
• Length: 405
• Species: Caenorhabditis elegans
• Alignment Length: 325
• Identity: 90/325 - (27%)
• Similarity: 140/325 - (43%)
• Gaps: 59/325 - (18%)

  Fly   136 DNVNTAI---GDPTLYSD-RCLENFLKVEE----KHHKIPDTYFS-IQKDITPPMRKIVAEWMME 191
            |||.|.|   .||.:..| |...|.::.||    .:|     ||: :|::|||..|:...:|:.:
 Worm    55 DNVRTLIYNRTDPHIQLDMRAFYNCMEYEEALQPNYH-----YFTGVQENITPFHREQAIDWIYD 114

  Fly   192 VCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRALSVDLLVVYTD 256
            |..||||..:|.|||::.:|||:|.:::.|..:|::|...|.:||||:.|  ..::...:..|:|
 Worm   115 VAKEENCDGDVFLLAVSLIDRFMSVQNILKHDIQMIAGVALFIASKLKAP--HPMTASKIAYYSD 177

  Fly   257 NSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDINIGKVRGHAQAFISLA 321
            ||...|.:::|||.:::.|.|:..|.|...|.:.|..|:|         .|..:||..|..:...
 Worm   178 NSCPIDMILQWELLIVTTLQWETESPTAFSFFDFLASRIP---------QIHNMRGDFQTVVQKC 233

  Fly   322 AKEHKFAKFSASTIAA-------------SSIAASMNGLKWHLRSGHNLHFLLSLMTDLTSVEQA 373
            .|.||.|....|...|             ..:|..:..|         |..:..|..:|......
 Worm   234 QKMHKLATLFPSMQCAIGLYYVSNLPTQNKELAVKIKDL---------LANMFQLEVNLLDSYIP 289

  Fly   374 QVRDCMLHMEDIFKEHSRNLEPFLVNIDPKEMSTLYYKRRFQIHQSQHLSQISIRPLPLPKAPAE 438
            .|:.||........|.:...||     .|...::......|     |.|.::...|||.|  |.|
 Worm   290 MVQRCMSTTPIYTSEDAEKTEP-----TPSAPASTQEPEAF-----QELKELKEEPLPTP--PPE 342

  Fly   439  438
             Worm   343  342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	47/139 (34%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	23/116 (20%)
cyd-1	NP_001369816.1	CYCLIN_CCND_rpt1	41..199	CDD:410219	52/150 (35%)