DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and Ccnd2

DIOPT Version :10

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_036021678.1 Gene:Ccnd2 / 12444 MGIID:88314 Length:349 Species:Mus musculus


Alignment Length:294 Identity:114/294 - (38%)
Similarity:169/294 - (57%) Gaps:25/294 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ERLTTTADPPATDNVNTAIGDPTLYSDRCLENFLKVEEKHHKIPD-TYFS-IQKDITPPMRKIVA 186
            |.|....||     |..|:.|..|..||.|:|.|.:||::  :|. :||. :||||.|.||::||
Mouse    62 ELLCCEVDP-----VRRAVPDRNLLEDRVLQNLLTIEERY--LPQCSYFKCVQKDIQPYMRRMVA 119

  Fly   187 EWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRALSVDLL 251
            .||:|||.|:.|:|||..||:||:||||:.....||.||:|.|.|:.|||||:|..  .|:.:.|
Mouse   120 TWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKTHLQLLGAVCMFLASKLKETI--PLTAEKL 182

  Fly   252 VVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDINIGKVRGHAQA 316
            .:|||||:...:|::|||.||.:|.|:|::|||.||:|.::.:||...:     .:..:|.|||.
Mouse   183 CIYTDNSVKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQKE-----KLSLIRKHAQT 242

  Fly   317 FISLAAKEHKFAKFSASTIAASSIAASMNGLKW----HLRSGHNLHFLLSLMT----DLTSVEQA 373
            ||:|.|.:.|||.:..|.||..|:.|::.||:.    :..:...|..||:.:|    |.....|.
Mouse   243 FIALCATDFKFAMYPPSMIATGSVGAAICGLQQDDEVNTLTCDALTELLAKITHTDVDCLKACQE 307

  Fly   374 QVRDCMLHMEDIFKEHSRNLEPFLVNIDPKEMST 407
            |:...:|:....|::...|.....|. ||.:.:|
Mouse   308 QIEALLLNSLQQFRQEQHNAGSKSVE-DPDQATT 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 CYCLIN_SF 144..278 CDD:477360 66/135 (49%)
CYCLIN_CCND_rpt2 283..387 CDD:410220 33/111 (30%)
Ccnd2XP_036021678.1 CYCLIN_CCND2_rpt1 61..209 CDD:410277 72/155 (46%)
CYCLIN_CCND2_rpt2 214..318 CDD:410280 33/108 (31%)

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