DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and ccno

DIOPT Version :10

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_073805797.1 Gene:ccno / 101883490 -ID:- Length:334 Species:Danio rerio


Alignment Length:232 Identity:59/232 - (25%)
Similarity:94/232 - (40%) Gaps:23/232 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 SIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLAS 236
            |.|..||...|..:..|::.|..:.:...|...||:|.|||||.:.||.....|:|....||:|:
Zfish    93 SRQPQITAEARSKLVSWLIAVRRQLSLSFESCCLAVNIMDRFLITTSVAADCFQLLGVTSLLIAT 157

  Fly   237 KLREPSCRALSVDLLVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLP----- 296
            |  :....:..:..|:....||..::.|...|..:|.||.:.|::.|...||:....|..     
Zfish   158 K--QVEVYSPRITQLLSLCCNSFSREQLCNLECLILLRLNFRLAAPTLAFFLDYFTSRFTGHQTG 220

  Fly   297 --IGSKNF-----PDINIGKVRGHAQAFISLAAKEHKFAKFSASTIAASSIAASMNGLKWHL--- 351
              |.::|.     |.....|.|..|.....|:..::.|.|:..|.||..::..:.:.||...   
Zfish   221 EFISAQNAHLHKEPSSAENKWRWLACKVCELSLADYTFNKYMPSVIAQCALKLAKDLLKTQSVQN 285

  Fly   352 ---RSGHNLHFLLSLMTDLTSVEQAQVRDCMLHMEDI 385
               .:|.:..........||...|...:.|   |||:
Zfish   286 SEDNTGASKMLCCEEEAPLTCENQLLFQQC---MEDL 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 CYCLIN_SF 144..278 CDD:477360 32/105 (30%)
CYCLIN_CCND_rpt2 283..387 CDD:410220 26/121 (21%)
ccnoXP_073805797.1 None

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