DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rhp and Rhpn2

DIOPT Version :10

Sequence 1:NP_511168.3 Gene:Rhp / 32531 FlyBaseID:FBgn0026374 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_082173.3 Gene:Rhpn2 / 52428 MGIID:1289234 Length:686 Species:Mus musculus


Alignment Length:681 Identity:260/681 - (38%)
Similarity:379/681 - (55%) Gaps:102/681 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ENEDDEKLNELSFCFVRGSDPRAATCRSKLQNRRCKLNKEINKELRLRAGAENLYKATSNRKLRD 81
            |.|.|:       .|.:|.:|.|.|.||||||:|..||::|.|.:|:|.|||||.|..:|:|:|:
Mouse    14 EKEGDD-------YFRKGCNPLAQTGRSKLQNQRAALNQQILKAVRMRTGAENLLKVATNQKVRE 71

  Fly    82 TVALELSFVNSNLQLLKEQLAELNSSVEIYQSESHNGIMPMIPLGLKETKEINFMEPFSDFILEH 146
            .|.||||||||:||:|||:|..||.||.:||.......:|:||||||||||::|...|.||||||
Mouse    72 QVRLELSFVNSDLQMLKEELEGLNISVGVYQGTEEAFTIPLIPLGLKETKEVDFSIVFKDFILEH 136

  Fly   147 YSEEPSMYIDAIADMTDTRQASKTPSRDALGVALLFRYYNTLYYVERRFFPPDRNLGVYFEWYDS 211
            |||:..:|.|.|||:.|.|||.:|||||..||.||..|:..|.:||.|||||.|::|:.|.||||
Mouse   137 YSEDSYLYEDDIADLMDLRQACRTPSRDEAGVELLMSYFIQLGFVESRFFPPTRHMGLLFTWYDS 201

  Fly   212 LTGVPSCQRTIAFEKACTLFNLGGIYTQIGARHDRTTERGLDLAVDSFLRAAGVFRHIYDTFTNA 276
            .||||..|:|:..|||..|||:|.:|||||.|.:|.|:.||:.|||:|.|||||..::.:|||:.
Mouse   202 FTGVPVSQQTLLLEKASVLFNIGALYTQIGTRCNRQTQAGLESAVDAFQRAAGVLNYLKETFTHT 266

  Fly   277 PSMDLKPQVLDVLVSLMLSQARECLFEKLQLQIEAMSHDCQAFRDLAGEAAQISHEYNEMHKNIQ 341
            ||.|:.|.:|.|||.:||:||:|.:|||:.|  ..:.::......:|.|||:::..|.::|..:.
Mouse   267 PSYDMSPAMLSVLVKMMLAQAQESVFEKVCL--PGIQNEFFVLVKVAQEAAKVAEAYRQLHAAMS 329

  Fly   342 ANDTHTYLPECWAGLVPVKAELYKAFAHFYKARSIDATDELKASKSSQKNQESFIGNSQEVERIT 406
            .......:|..||.:..|||..|.|.||:: |.::....:||.. :.:.:||..:  ||..:|: 
Mouse   330 QEPVKENIPYSWASVAYVKAYHYGALAHYF-AATLLIDHQLKPG-ADEDHQEKCL--SQLYDRM- 389

  Fly   407 TADYGASDEASTSIAN-KLA---------HLKEALASIEEAQRLQRMCRFLKNKASLTEVMKEVH 461
                   .|..|.:|. |.|         ||..|:...||:.|...:|:.|::...|.:|:...|
Mouse   390 -------PEGMTPLATLKNAGQRVLLGKGHLHRAIGFHEESLREANLCKKLRDIQVLRDVLSAAH 447

  Fly   462 SKSQEELEKFRLQASAKNIEDGDLL------------ERSVEASSKFTLSLTGPDFTSHKVKDPF 514
            .::|.:..:.|        ||.|||            ||.|:        :|.|||:...|.|.|
Mouse   448 QRTQLKHTQHR--------EDDDLLNLIDAPDVLPKTEREVK--------ITFPDFSKVTVTDFF 496

  Fly   515 KRLGPIAIFSARRHWTAPRCVRLQKGSSLYHSVPSNDNKCPLDNDDDEEHDGGYNLYKEEFENFG 579
            ::|||:::|||.:.|:.||        .::.:|...|                          .|
Mouse   497 QKLGPLSVFSASKRWSPPR--------GIHFTVEEGD--------------------------LG 527

  Fly   580 FHVRGDAPVIIAHVEINSLADLGGIKEGDFIVEIAGVDVKWYSHQQVVQLIQSC-GSTLELRVIT 643
            |.:||:.||.:..::.:..|.|.|.||||:||.|.|||.||.:..:|::|::|. |..:|::|::
Mouse   528 FTLRGNTPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS 592

  Fly   644 PMDRNYLKPLSSKGSLSTLSAASSSGISSGF 674
            .:|        |..|:....|..|.|:...:
Mouse   593 LLD--------STSSMHNKCATYSVGMQKTY 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhpNP_511168.3 HR1_Rhophilin-1 34..118 CDD:212023 47/83 (57%)
BRO1_Rhophilin 122..514 CDD:185767 163/413 (39%)
PDZ_canonical 578..642 CDD:483948 26/64 (41%)
Rhpn2NP_082173.3 HR1_Rhophilin-2 27..108 CDD:212024 46/80 (58%)
Interaction with Rho. /evidence=ECO:0000250 46..66 10/19 (53%)
BRO1_Rhophilin_2 112..496 CDD:185772 163/413 (39%)
PDZ_rhophilin-like 514..591 CDD:467196 30/110 (27%)

Return to query results.
Submit another query.