DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rhp and Brox

DIOPT Version :10

Sequence 1:NP_511168.3 Gene:Rhp / 32531 FlyBaseID:FBgn0026374 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001020840.1 Gene:Brox / 305031 RGDID:1307161 Length:411 Species:Rattus norvegicus


Alignment Length:333 Identity:70/333 - (21%)
Similarity:130/333 - (39%) Gaps:96/333 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 YIDAIADMTDTRQASKTPSRDALGVALLFRYYNTLYYVERRFFPPDRNLGVYFEWYDSLTG-VPS 217
            :|:::.|.|   |.||                  |.|::.            |:|.|:|.| |||
  Rat    71 FINSVGDST---QESK------------------LRYIQN------------FKWTDTLQGHVPS 102

  Fly   218 CQRTIAFEKACTLFNLGGIYTQIGAR---HDRTTERGLDLAVDSFLRAAGVFRHIYDTFTNAPSM 279
            .|:...||.....||:...||:..:|   .:..||........|...|||:|:|:.:  ::.|.:
  Rat   103 AQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKE--SHIPKL 165

  Fly   280 --------DLKPQVLDVLVSLMLSQARECLFEK-LQLQ-----IEAMSHDCQAFRDLAGEAAQIS 330
                    ||:.:::|..:....::|:|....: ::|:     |.|::::..:|...|      .
  Rat   166 LTPAEKGRDLEARLIDAYIIQCQAEAQEVTIARAIELKHAPGLIAALAYETASFYQKA------D 224

  Fly   331 HEYNEMHKNIQANDTHTYLPECWAGLVPVKAELYKAFAHFYKARSIDATDEL-KASKSSQKNQES 394
            |..:.:.....|.         |...:.:|...|.|:|:.|..:::.|:|:. :|.:|.|:.::.
  Rat   225 HTLSSLEPAHSAK---------WRKYLHLKMCFYTAYAYCYHGQTLLASDKCGEAIRSLQEAEKL 280

  Fly   395 FIGNSQEVERITTADYGASDEASTSIANKLAHLKEALASIEEAQRLQRMCRFLKNKASLTEVMKE 459
            :    .|.|.: ..:||.: :.....|....||                  |.:...||   :|.
  Rat   281 Y----AEAEAL-CKEYGET-KGPGPTAKPSGHL------------------FFRKLGSL---VKN 318

  Fly   460 VHSKSQEE 467
            ...|.|.|
  Rat   319 TLDKCQRE 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhpNP_511168.3 HR1_Rhophilin-1 34..118 CDD:212023
BRO1_Rhophilin 122..514 CDD:185767 70/333 (21%)
PDZ_canonical 578..642 CDD:483948
BroxNP_001020840.1 BRO1_Brox_like 4..356 CDD:185766 70/333 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 376..411
Blue background indicates that the domain is not in the aligned region.

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