DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rhp and Rhpn1

DIOPT Version :10

Sequence 1:NP_511168.3 Gene:Rhp / 32531 FlyBaseID:FBgn0026374 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001398180.1 Gene:Rhpn1 / 14787 MGIID:1098783 Length:662 Species:Mus musculus


Alignment Length:673 Identity:249/673 - (36%)
Similarity:365/673 - (54%) Gaps:68/673 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EDDEKLNELSFCFVRGSDPRAATCRSKLQNRRCKLNKEINKELRLRAGAENLYKATSNRKLRDTV 83
            :||..:.:....||:...       .:||:.|.:|:::|:||||:|.||||||:||||..:|:||
Mouse    20 QDDGSIRKGYGSFVQNQP-------GQLQSHRARLHQQISKELRMRTGAENLYRATSNTWVRETV 77

  Fly    84 ALELSFVNSNLQLLKEQLAELNSSVEIYQSESHNGIMPMIPLGLKETKEINFMEPFSDFILEHYS 148
            |||||:||||||||||:||||::||::.|.|.....:||||||||||||:::..|..:.|.||:.
Mouse    78 ALELSYVNSNLQLLKEELAELSTSVDVDQPEGEGITIPMIPLGLKETKELDWATPLKELISEHFG 142

  Fly   149 EEPSMYIDAIADMTDTRQASKTPSRDALGVALLFRYYNTLYYVERRFFPPDRNLGVYFEWYDSLT 213
            |:.:.:...|.::.|.|||::|||||..|:.||..||:.|.:::.|||.|.|:.|:.|.||||||
Mouse   143 EDGTSFETEIQELEDLRQATRTPSRDEAGLDLLAAYYSQLCFLDARFFSPSRSPGLLFHWYDSLT 207

  Fly   214 GVPSCQRTIAFEKACTLFNLGGIYTQIGARHDRTTERGLDLAVDSFLRAAGVFRHIYDTFTNAPS 278
            |||:.||.:||||...|||:|.::||||||.|.:...|.:.|.::|.||||.||.:.:.|::|||
Mouse   208 GVPAQQRALAFEKGSVLFNIGALHTQIGARQDCSCTEGTNHAAEAFQRAAGAFRLLRENFSHAPS 272

  Fly   279 MDLKPQVLDVLVSLMLSQARECLFEKLQLQIEAMSHDCQAFRDLAGEAAQISHEYNEMHKNIQAN 343
            .|:....|.:|..||::||:||:|:.|.|...|....|.....||.||||::.||..:|:.:...
Mouse   273 PDMSAASLSMLEQLMIAQAQECIFKGLLLPASATPDICPDQLQLAQEAAQVATEYGLVHRAMAQP 337

  Fly   344 DTHTYLPECWAGLVPVKAELYKAFAHFYKARSIDATDELKASKSSQKNQESFIGNSQEVERITTA 408
            ....|||..|..|..||||.:.|.||::.|.::  .:...|:|.....||.....|...|.:   
Mouse   338 PVRDYLPASWTNLAHVKAEHFCALAHYHAAMAL--CESHPAAKGELARQEHVFQPSTPHEPL--- 397

  Fly   409 DYGASDEASTSIANKL--AHLKEALASIEEAQRLQRMCRFLKNKASLTEVMKEVHSKSQEELEKF 471
              |.:.........||  ||||.|:...|||.||..:||.|: |..|.:|:  |....:..|.|:
Mouse   398 --GPTLPQHPEDRRKLAKAHLKRAILGQEEALRLHTLCRVLR-KVDLLQVV--VTQALRRSLAKY 457

  Fly   472 RLQASAKNIEDGDLLERS----VEASSKFTLSLTGPDFTSHKVKDPFKRLGPIAIFSARRHWTAP 532
                |....|| |..|.:    ::..:..|..:..|..:..||.|.|.||||:::||.:..|...
Mouse   458 ----SQLERED-DFFEATEAPDIQPKTHQTPEVRMPSLSQVKVTDFFHRLGPLSVFSTKNRWQLV 517

  Fly   533 RCVRLQKGSSLYHSVPSNDNKCPLDNDDDEEHDGGYNLYKEEFENFGFHVRGDAPVIIAHVEINS 597
            ..|.:.:|..                                  :|||.:|||:||:||.|....
Mouse   518 GPVHMTRGEG----------------------------------SFGFTLRGDSPVLIAAVVPGG 548

  Fly   598 LADLGGIKEGDFIVEIAGVDVKWYSHQQVVQLIQSCGST-LELRVITPMDRNYLKPLSSKGSLST 661
            .|:..|:||||:||.:.|...||:.|.:||..::|.|.. :.|:|:     :.|.....:|:...
Mouse   549 QAESAGLKEGDYIVSVNGQPCKWWKHLEVVTQLRSMGEEGVSLQVV-----SLLPSPEPRGTGPR 608

  Fly   662 LSAASSSGISSGFPSPTSIAAKP 684
            .:|...:....||.:|.....:|
Mouse   609 RAALLWNQRECGFETPMPTRTRP 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhpNP_511168.3 HR1_Rhophilin-1 34..118 CDD:212023 46/83 (55%)
BRO1_Rhophilin 122..514 CDD:185767 152/397 (38%)
PDZ_canonical 578..642 CDD:483948 28/64 (44%)
Rhpn1NP_001398180.1 HR1_Rhophilin-1 28..112 CDD:212023 48/90 (53%)
BRO1_Rhophilin_1 116..499 CDD:185771 152/397 (38%)
PDZ_rhophilin-like 519..594 CDD:467196 30/108 (28%)

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