DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Paf-AHalpha and ATRN

Sequence 1:NP_525089.2 Gene:Paf-AHalpha FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_647537.1 Gene:ATRN HGNCID:885 Length:1429 Species:Homo sapiens

Alignment Length:28 Identity:8/29 (28%)
Similarity:14/29 (48%) Gaps:5/29 (17%)


  Fly    40 LGDCIFETVQDTEAW-----NKYFAPLH 62
            |.|.::....||:.|     :::|..||
Human   530 LADDLYRYDVDTQMWTILKDSRFFRYLH 557

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 8/29 (28%)
ATRNNP_647537.1 CUB 132..247 CDD:238001
KELCH repeat 341..382 CDD:276965
Kelch_3 350..400 CDD:290151
Kelch_5 390..428 CDD:290565
KELCH repeat 392..441 CDD:276965
KELCH repeat 448..496 CDD:276965
KELCH repeat 501..550 CDD:276965 5/20 (25%)
KELCH repeat 554..609 CDD:276965 2/5 (40%)
CLECT_attractin_like 788..920 CDD:153067
PSI 932..983 CDD:279745
EGF_Lam 1062..1107 CDD:238012
EGF_Lam 1108..1153 CDD:238012
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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