DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Paf-AHalpha and ATRNL1

Sequence 1:NP_525089.2 Gene:Paf-AHalpha FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_997186.1 Gene:ATRNL1 HGNCID:29063 Length:1379 Species:Homo sapiens

Alignment Length:94 Identity:18/95 (19%)
Similarity:30/95 (32%) Gaps:37/95 (39%)


  Fly   127 AYIVLPSLLPRGQQPNKLREK---NAKINEVVNGLTKGLYRVQTVAIDKGLVQTDGSISHHDMFD 188
            :|.:||::.|......:...|   :.|...|:.|.|                           |:
Human   289 SYWILPNVKPFSPSVGRASHKAVLHGKFMWVIGGYT---------------------------FN 326

  Fly   189 YKNLTNAGAKKILEPLYDLLSQILNENEP 217
            |.:.     :.:|.  |:|.|.|.|...|
Human   327 YSSF-----QMVLN--YNLESSIWNVGTP 348

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 16/88 (18%)
ATRNL1NP_997186.1 CUB 93..208 CDD:238001
DSL <235..280 CDD:302925
KELCH repeat 305..349 CDD:276965 14/79 (18%)
Kelch 1 316..365 12/68 (18%)
Kelch_5 352..392 CDD:290565
KELCH repeat 355..408 CDD:276965
Kelch 2 367..415
Kelch 3 427..475
Kelch_4 468..514 CDD:290154
Kelch 4 480..531
KELCH repeat 521..574 CDD:276965
Kelch 5 533..591
Kelch_5 581..614 CDD:290565
Kelch 6 592..638
CLECT_attractin_like 748..874 CDD:153067
PSI 889..938 CDD:279745
EGF_Lam 1013..1058 CDD:238012
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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