DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL3 and RPL3

DIOPT Version :10

Sequence 1:NP_511166.2 Gene:mRpL3 / 32523 FlyBaseID:FBgn0030686 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_014706.1 Gene:RPL3 / 854229 SGDID:S000005589 Length:387 Species:Saccharomyces cerevisiae


Alignment Length:336 Identity:77/336 - (22%)
Similarity:119/336 - (35%) Gaps:74/336 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GNSSVLVTQVRDKGHLSRPRLRNPQWFLRKEITKYNDLMTAENKQFVNEVGTNNFGVPAVIKDSL 80
            |..:.:.|.|||   |.||..:    |.::|:.           :.|..|.|....|..|:  ..
Yeast    48 GYKAGMTTIVRD---LDRPGSK----FHKREVV-----------EAVTVVDTPPVVVVGVV--GY 92

  Fly    81 VKT-AGPTANEAVWTPNLRRCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPA 144
            |:| .|..:...||..:|  ...:.|:.  |..|.|:.::..|       .:..||......:..
Yeast    93 VETPRGLRSLTTVWAEHL--SDEVKRRF--YKNWYKSKKKAFT-------KYSAKYAQDGAGIER 146

  Fly   145 QVPTVANLHKRGCILVGSETTNPALLTKE--YAGIFRNSGVLPKK-NLAR--FIVSPEAQLAPGT 204
            ::..:........:||.::.....|..|:  .|.|..|.|.:.:| :.||  |    |..:|..:
Yeast   147 ELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHF----EKTVAVDS 207

  Fly   205 PLNVNHFRVGDFVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIG--GGGEKGRVWP 267
            .     |...:.:|....|..|||:||..|.|.|.:|     .||||....:.  |......|..
Yeast   208 V-----FEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP-----RKTHRGLRKVACIGAWHPAHVMW 262

  Fly   268 GTKMPGHMGNRWRIIKGLRVWRINTKYNVMWVQGSSVA-GPTGGLVYIYDTILPTRKNKEAPPFP 331
            .....|..|...|.....:::|:.        :|...| |.|.     :|     |..|...|..
Yeast   263 SVARAGQRGYHSRTSINHKIYRVG--------KGDDEANGATS-----FD-----RTKKTITPMG 309

  Fly   332 TF--YGEPQQD 340
            .|  |||.:.|
Yeast   310 GFVHYGEIKND 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL3NP_511166.2 rpl3p 101..314 CDD:444836 47/220 (21%)
RPL3NP_014706.1 PTZ00103 1..387 CDD:240267 77/336 (23%)

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