DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL3 and Rpl3l

DIOPT Version :8

Sequence 1:NP_511166.2 Gene:mRpL3 / 32523 FlyBaseID:FBgn0030686 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001157417.1 Gene:Rpl3l / 66211 MGIID:1913461 Length:407 Species:Mus musculus

Alignment Length:179 Identity:39/180 (22%)
Similarity:60/180 (33%) Gaps:53/180 (29%)


  Fly   180 NSGVLPKKNLARFIVSPEAQLAPGTPLNVNHFRVGDFVDVRGKTVDHGFQGVVKRHGFKGMPASH 244
            |.|.:.:|     :...:|::....|:: :.|...:.:||...|...|.:||..|...|.:|   
Mouse   186 NGGTVAEK-----VAWVQARMEKQVPVH-SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--- 241

  Fly   245 GVTKTHRRAGNIG--GGGEKGRVWPGTKMPGHMGNRWRIIKGLRVWRI----------------N 291
              .|||:....:.  |.....||.......|..|...|.....:::||                :
Mouse   242 --RKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVRNNAS 304

  Fly   292 TKYNVMWVQGSSVAGPTGGLVYIYDTILPTRKNKEAPPFPTFYGEPQQD 340
            |.|:   |...|:. |.||                   || .|||...|
Mouse   305 TSYD---VTDKSIT-PLGG-------------------FP-HYGEVNND 329

Known Domains:


GeneSequenceDomainRegion External IDIdentity
mRpL3NP_511166.2 RplC 101..314 CDD:294230 33/152 (22%)
Rpl3lNP_001157417.1 PTZ00103 1..400 CDD:240267 39/180 (22%)
RplC 7..373 CDD:294230 39/180 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0087
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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