DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mvd and mvd

DIOPT Version :10

Sequence 1:NP_573068.3 Gene:Mvd / 32520 FlyBaseID:FBgn0030683 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_004913618.2 Gene:mvd / 394871 XenbaseID:XB-GENE-975218 Length:417 Species:Xenopus tropicalis


Alignment Length:401 Identity:209/401 - (52%)
Similarity:266/401 - (66%) Gaps:22/401 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSVTCVAPVNIALIKYWGKRHEELILPVNDSISMTLSTDELCAKTTVTASESFETNRMWLNGEE 65
            |..|||.||||||:||||||::||||||:|.|:|:||..|:|...|:..||..|..:|:||||:|
 Frog    24 MKKVTCTAPVNIAVIKYWGKQNEELILPINSSLSVTLHQDQLKTTTSAAASREFTEDRIWLNGKE 88

  Fly    66 VPFEESS--RLQRCLNEVHRLA----VASGSQKVPPTW--KLHIASVNNFPTAAGLASSAAGYAC 122
               |..|  |||.||.|:.|||    ...|.:.|....  |:||.||||||||||||||||||||
 Frog    89 ---ENISHPRLQSCLREIRRLARKRRNEEGDENVSRILNDKVHICSVNNFPTAAGLASSAAGYAC 150

  Fly   123 LVYSLSRLYDIPLNEELTTVARQGSGSACRSLYGGFVQWHRGALDDGSDSVARQIAPSDHWPNMH 187
            |||:|::||.:  ..||:.:|||||||||||:|||||||..|..|||.||:|:|:.|..|||.:.
 Frog   151 LVYTLAKLYGV--EGELSEIARQGSGSACRSMYGGFVQWVMGERDDGKDSLAKQVEPESHWPELR 213

  Fly   188 VLILVVNDARKKTASTRGMQQAVKTSQLIKHRVDQVVPDRIIRLREAIASHDFQAFAEITMKDSN 252
            |||||....:|...||.|||.:|:||.|:|.|.|.|||:|:..:.|:|...||:||.|:||||||
 Frog   214 VLILVATAEKKHVGSTAGMQTSVETSPLLKLRADLVVPERMEAMIESIRKKDFKAFGELTMKDSN 278

  Fly   253 QFHAIALDTYPPCVYMNDVSHSIVSFVHDYNERMGSYHAAYTFDAGPNACLYVLAEHVPHLLSAI 317
            ||||..||||||..|:|.||..::|.||.||...|....||:|||||||.:::|...|...:..:
 Frog   279 QFHATCLDTYPPIFYLNSVSQRVISVVHQYNTYYGQTKVAYSFDAGPNAVIFMLEPTVNEFVEVV 343

  Fly   318 QKVFPNDLADGGTYLRGLPIPKVQDAESSKLDSLDVHAKN--AFRYIIHTKVGEGPKELSADNSL 380
            :..||.: ::|.|||:|||:.....:|.  |.|:.....|  ..||||:||.|.|| .||.|.:|
 Frog   344 KHCFPPE-SNGDTYLKGLPVGSAVLSEG--LQSIVASDPNPGGVRYIIYTKPGPGP-TLSQDLTL 404

  Fly   381 LI---NGLPLK 388
            .:   :||||:
 Frog   405 DLLDADGLPLQ 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MvdNP_573068.3 MDD_C 1..322 CDD:475042 179/328 (55%)
mvdXP_004913618.2 MDD_C 27..354 CDD:475042 180/332 (54%)

Return to query results.
Submit another query.