DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HUWE1 and UPL7

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_190877.1 Gene:UPL7 / 824475 AraportID:AT3G53090 Length:1142 Species:Arabidopsis thaliana


Alignment Length:995 Identity:232/995 - (23%)
Similarity:383/995 - (38%) Gaps:258/995 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  4346 KLIVNLT-QCSQASSAIFIQYLTAAILGLAEEVRQAIQMLLNE---------------IRMYNIH 4394
            |:|.|.. :.::.:..|.||::.:...|....||:.|:.|...               :|.:::.
plant   198 KIITNENFEDAETAKKIIIQFIGSCKSGYYSAVRRYIKTLTKHTDERLVITTSAVTLALRPFHVK 262

  Fly  4395 QGGAGTTSQAASTSGAAAATASYVPTVSG-ASLLPNLAV----HEGIMQDRFTAEHV-------- 4446
            | .|........|:.|.....|.:.|:.. ...||:..:    |:.|:...|   |.        
plant   263 Q-PAFVDDNQPDTNLAVEEYVSLILTIPRLVCYLPSALIRALKHKSILMPSF---HTILLLKDKI 323

  Fly  4447 --IISAPKNA-KPTCELQLPSMKKLMSN-----------------SSAQPYFLRTLKIFMQVRDM 4491
              |||..:|: |.:|.:::||:..::.|                 |:.:.:::..:.:.:.:   
plant   324 LNIISEMENSEKQSCTMEIPSVGWVIGNIISLATVSETDFMDPQESNPEMFYVLYVHVIVTL--- 385

  Fly  4492 YEAQNGLSTGGGVACGAGDNDDDIIDIEGDGGASGGSSSDMAPGSASTISPPPPME--------T 4548
              |:|.||....|..     .|..:|||       .:|::...|::..||....:.        .
plant   386 --AENLLSQVESVGI-----QDIHLDIE-------ATSNETEKGNSVKISFVEMLRPVCQQWHLA 436

  Fly  4549 NQIAQDGDDDEEDDDEARSFPGVGNHAVASASKSTKPTLS------------QILC--------L 4593
            ..:|..|          :....:.:...:::||....||.            :|.|        |
plant   437 KLLAASG----------KEIRVIADKDASTSSKKGSETLGLLDIARLYSCMLRIFCVMNPVLGPL 491

  Fly  4594 DVLWNTLSEC---LVALEESKDEFAVLVLQP----TVEAFFLIHASHRGA--------------- 4636
            .|| |.||.|   :|:|..|.:.    ||.|    |.:     .|||..|               
plant   492 PVL-NMLSFCPGYIVSLWNSLES----VLLPENGCTAD-----DASHGSAKTSWNTRSPSEKKLK 546

  Fly  4637 --------------SKKSGRSFMPNAAGFGLRAAAGAGAIGG-----------LGAAAPSAQEYS 4676
                          :|.||:|..|...........|:|.:..           .|.....::|.|
plant   547 HLKNDSVNKWVNVLNKFSGKSPGPREHVECTSDQPGSGQVNESTNDVWDVETLRGGPVGISKEVS 611

  Fly  4677 --------------PFMDDVSSANTPSSASFDDEPRMQDASTNTPLV-------TNPSTSTAMSA 4720
                          ..:||:....  ....|..|.:.:.||....||       |.|.:...|.:
plant   612 CLLHLFCATYAHLLVVLDDIQFYE--KQVPFMLEKQQRIASMLNTLVYYGLLRGTGPESRQLMDS 674

  Fly  4721 -----HEAQLRQDRQKF----------------LQFAEKHRTVL--NQILRQSPTHLSDGPFAVL 4762
                 |....|..|..|                :.||.:...||  :.:|    |..|.|....:
plant   675 AIRCLHLLYERDCRHPFCASALWLSPGRTSRPPIAFAARTHEVLPTSDVL----TTPSMGSVITI 735

  Fly  4763 VDHTRILDFDVKRKYFQTELERLDEGIRREEHTVS----------VRRVTVFEDSFRVLYRLGPE 4817
            ..|  :..|:.:...|:..:.: |:..|:....|.          |||..|.||.|:.|..:| .
plant   736 TPH--VFPFEERVHVFREFISK-DKASRKMAGEVDAPGARSIEIVVRRGHVVEDGFQQLNSIG-S 796

  Fly  4818 EWKNRFYIVFEDEE-----GQDAGGLLREWYVIISREIFNPMYALFCVSPGDRVTYMINPSSHAN 4877
            ..|:..::.|.:|.     |.|.|||.:|:...|::..|...|.||..:|......:.:||:...
plant   797 RLKSSIHVSFVNESGLPEAGLDYGGLSKEFLTDITKAAFATEYGLFSQTPTSDRLLVPSPSARHL 861

  Fly  4878 PNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHILGKQVKHTDMESQDYEFYKGLDYL--MKN 4940
            .|.:...:|:||::.||:::..||:..|:..|.:.:||:.....::...|.|.|:.|.|:  ...
plant   862 ENGIQMIEFLGRIVGKALYEGILLDYSFSHVFIQKLLGRYSFIDELSGLDPELYRNLMYVKHYDG 926

  Fly  4941 DISTLGYELTFSTEVQEF-GVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFL 5004
            |:..|..:.|.:   :|| |...|.:|||.|:||:||.|||.:|:..:...|::..|....:||.
plant   927 DLKELCLDFTVT---EEFCGKMSIIELKPGGKDTSVTNENKMQYIHAMADYKLNRQIVPFSNAFY 988

  Fly  5005 EGFYDIIPKHLISIFNEQEL-ELLISGLPDIDIEDLKANTEY-HKYTSKSAQIQWFWRALRSFDQ 5067
            .|..|:|....:.:||..|. :||..|..|||::||:.||:| ..|:..|..|:.||..::.|:.
plant   989 RGLTDLISPAWLKLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEP 1053

  Fly  5068 ADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQKFQIHR-----------DDRSTDRLPCAHTCFNQ 5121
            ::|...|:|||..|:.||.||..|:     ..|.||:           ..:..:|||.|.||:|.
plant  1054 SERCLLLKFVTSCSRAPLLGFKYLQ-----PTFIIHKVSCDTSLWAAIGGQDVERLPSASTCYNT 1113

  Fly  5122 LDLPMYKSYDKLRSCLLKAI 5141
            |.||.||....:|..||.||
plant  1114 LKLPTYKRASTMREKLLYAI 1133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 121/377 (32%)
UPL7NP_190877.1 IQCD 33..>62 CDD:467745
HECTc 774..1140 CDD:238033 120/369 (33%)
Blue background indicates that the domain is not in the aligned region.

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