DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and UPL6

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_188346.2 Gene:UPL6 / 820979 AraportID:AT3G17205 Length:1029 Species:Arabidopsis thaliana


Alignment Length:808 Identity:204/808 - (25%)
Similarity:336/808 - (41%) Gaps:137/808 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  4436 IMQDRFTAEHVIISAPKNAKPTCELQLPSMKKLMSNSSAQPYFLRTLKIFMQVRDMYEAQNGLST 4500
            ::..|::...:|::.|...|     ..|::|.:.:|.|...:::..:...:|.............
plant   261 VVDPRWSFSSMILTIPLIWK-----LFPNLKVVFANPSLSQHYIHQMASCIQKDTCVLPMETSPE 320

  Fly  4501 GGGVACGAGDNDDDIIDIEGDGGASGGSSSDMAPGSASTISPPPPMETNQ-IAQDGDDDEED--- 4561
            ..|.||..|:..|....:......|...:.|:|..:...:...||::::: .::.|..||:|   
plant   321 FPGYACLLGNTLDTANVVLSQPECSLDMAIDIALVATFFLETLPPVKSSEGESRQGSSDEDDMLI 385

  Fly  4562 DDEARSFPG-VGNHAVASASKSTKPTLSQILCLDVLWNTLSECLVALEESKDEFAVLVLQPTVEA 4625
            ||    .|| |.|.|:.....:...:...:...:||:..:|..:.:.:|.|:..|:......:.|
plant   386 DD----VPGLVLNKALEQQITNAIDSRFLLQLTNVLFRQVSLGMQSYDEDKEALAIGTASSFLYA 446

  Fly  4626 FF-----------------LI----------HASHRGASKKSGRSFMP-NAAGFGLRAAAGAGAI 4662
            .|                 |:          |.:.:.:|.....:::| :|.|:.|.........
plant   447 AFNTLPLERIMTILAYRTELVAVLWNYMKRCHENQKWSSMPKLLAYLPGDAPGWLLPLVVFCPVY 511

  Fly  4663 GGLGAAAPSAQEYSP------------------------FMDDVSSANTPSSASFD---DEP--- 4697
            ..:.....:.:.|..                        :::.::..||..|.|.|   ..|   
plant   512 KHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQPNTGKSVSNDLSKKNPIEL 576

  Fly  4698 --------------RMQDASTNTPLVTNPSTSTAMSAHEAQLRQDRQKFLQFAEKHRTVLNQILR 4748
                          ::||.: |....|:.|...|.|.:|        .|:..|....|..|.||.
plant   577 IQNRMGIVVSELLSQLQDWN-NRKQFTSSSDFQADSVNE--------YFISQAIMEGTRANYILM 632

  Fly  4749 QSPTHLSDGPFAVLVDHTRILDFDVKRKYFQTELERLDEGIRREEH---------TVSVRRVTVF 4804
            |:|.               ::.|..:.|.|.|:|     ...|:.|         ...:||..:.
plant   633 QAPF---------------LIPFTSRVKIFTTQL-----ATARQSHGSQGIFARNRFRIRRDHIL 677

  Fly  4805 EDSFRVLYRLGPEEWKNRFYIVF-----EDEEGQDAGGLLREWYVIISREIFNPMYALFCVSPGD 4864
            ||::..:..|..::.::...:.|     .:|.|.|.||:.:::...|:|..|:..|.|| ....|
plant   678 EDAYNQMSALSEDDLRSSIRVTFVNELGVEEAGIDGGGIFKDFMEKITRAAFDVQYGLF-KETAD 741

  Fly  4865 RVTYMINPSSHANPNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHILGKQVKHTDMESQDYE 4929
            .:.|....|...:..||.:|.|:|.::|||:.:..|::..|...|...:..|.....|:.|.|.|
plant   742 HMLYPNPGSGMIHEQHLQFFHFLGSLLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPE 806

  Fly  4930 FYKGLDYL--MKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKM 4992
            .|:.|.:|  .|.|||.|  ||.|.....|:|.....:|.|.|:|..||.||...::.||...::
plant   807 LYRHLIFLKRYKGDISDL--ELYFVILNNEYGERTEEELLPGGQDMRVTNENVITFIHLVSNHRL 869

  Fly  4993 SGSIRQQLDAFLEGFYDIIPKHLISIFNEQELELLISGLPD-IDIEDLKANTEY-HKYTSKSAQI 5055
            :..||||...||.||..:|||..|.:|||.||::||||..| :||:||:.||.| ..|.:....|
plant   870 NFQIRQQSSHFLRGFQQLIPKEWIDMFNEHELQVLISGSVDSLDIDDLRNNTNYAGGYHAGHYVI 934

  Fly  5056 QWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQKFQIHRDDRSTDRLPCAHTCFN 5120
            ..||..::||...::.|||:||||.|:.||.||..||....||:......:.|.||||.:.||.|
plant   935 DMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAAGSASNESVDRLPTSATCMN 999

  Fly  5121 QLDLPMYKSYDKLRSCLLKAIHECSEGF 5148
            .|.||.|:|.:.|.:.|:.|| ....||
plant  1000 LLKLPPYQSKELLETKLMYAI-SAEAGF 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 129/362 (36%)
UPL6NP_188346.2 HECTc 667..1027 CDD:238033 129/364 (35%)
Blue background indicates that the domain is not in the aligned region.

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