DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and ube3c

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:NP_001072518.1 Gene:ube3c / 779973 XenbaseID:XB-GENE-1011935 Length:1082 Species:Xenopus tropicalis


Alignment Length:438 Identity:134/438 - (30%)
Similarity:222/438 - (50%) Gaps:49/438 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  4740 RTVLNQILRQSPTHLS-DGPFAVLVDHTRILDFDVKRKYFQTELERLDEGIRREEH--------- 4794
            ::.|:..|..:|..:| :...|:|.:...::.|:.:.|.||    ||....::|..         
 Frog   662 QSTLDVGLEPAPLSVSEERQLAILTELPFVVPFEERVKIFQ----RLIYADKQEVQGDGPFIDGI 722

  Fly  4795 TVSVRRVTVFEDSFRVLYRLGPE---EWKNRFYIVF-----EDEEGQDAGGLLREWYVIISREIF 4851
            .|::||..::||::.   :|.||   :.|.|..:..     .||.|.|.||:.||:...:.:..|
 Frog   723 NVTIRRNYIYEDAYD---KLSPENEPDLKKRIRVHLLNTHGLDEAGIDGGGIFREFLNELLKSGF 784

  Fly  4852 NPMYALFCVSPGDRVTYMINPSSH--ANPNHLSYFKFVGRVIAKAVHDNKLLECYFTRSFYKHIL 4914
            ||....| .:..:.:.|. ||::.  ...:...::.|:||::.||:::|.|:|..|...|...:|
 Frog   785 NPNQGFF-KTTNEGLLYP-NPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFASFFLSKLL 847

  Fly  4915 GK----QVKHTDMESQDYEFYKGLDYL--MKNDISTLGYELTFSTEVQEFGVTQIRDLKPNGRDT 4973
            |.    .:.|  :.|.|.|.|:.|.:|  .::|:..||  |.|:....:.|..|:.:||..|:|.
 Frog   848 GTSADVDIHH--LASLDPEMYRNLLFLKSYEDDVEELG--LNFTVVNNDLGEAQVVELKAGGKDI 908

  Fly  4974 AVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLISIFNEQELELLISG--LPDIDI 5036
            .||..|:..|:.||...:::..||....||.:|..:::....:.:|::|||::||||  :| |.:
 Frog   909 PVTSANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRMFDQQELQVLISGAQVP-ICL 972

  Fly  5037 EDLKANTEYH-KYTSKSAQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFGSLEGMNGIQKF 5100
            :|||:.|.|. .|::..|.|:.|||.:.:|...::.|.|:|||..|:.||.||..|     ...|
 Frog   973 DDLKSFTNYSGGYSADHAVIKIFWRVVENFTDEEKRKLLKFVTSCSRPPLLGFKEL-----YPAF 1032

  Fly  5101 QIHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKAIHECSEGF 5148
            .||......:|||.|.||.|.|.||.:.....::|.||.|| ||:.||
 Frog  1033 CIHNGGSDLERLPTASTCMNLLKLPEFYDEHLMKSKLLYAI-ECAAGF 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 121/372 (33%)
ube3cNP_001072518.1 IQ 47..64 CDD:197470
HECTc 724..1080 CDD:238033 121/372 (33%)
Blue background indicates that the domain is not in the aligned region.

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