DRSC/TRiP Functional Genomics Resources

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Protein Alignment HUWE1 and ube3a

DIOPT Version :10

Sequence 1:NP_001285288.1 Gene:HUWE1 / 32510 FlyBaseID:FBgn0030674 Length:5151 Species:Drosophila melanogaster
Sequence 2:XP_012812141.1 Gene:ube3a / 407881 XenbaseID:XB-GENE-948557 Length:908 Species:Xenopus tropicalis


Alignment Length:1049 Identity:237/1049 - (22%)
Similarity:389/1049 - (37%) Gaps:290/1049 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  4238 QRAGAAAAAAHPPPPQPPAENTATATEIGDGLAANIEEQASPASGNPASGDSNAGAKRTQLPTLS 4302
            :|.||         |:|....|.|             .::||  |:...||.             
 Frog    11 EREGA---------PEPEERRTNT-------------PRSSP--GHSPEGDR------------- 38

  Fly  4303 VALPVTPSKPRRKIYSKNFSQLQL-------VIEVLTHQCGTTEGLDNVAKLIVNLTQCSQASSA 4360
                 :|..|    ||:|....::       :||...||  .|||..|  :...| ..|:...:.
 Frog    39 -----SPGDP----YSENLENSRMKRAAAKHLIERYYHQ--LTEGCGN--ETCTN-EFCASCPTF 89

  Fly  4361 IFIQYLTAAILGLAEEVRQAIQMLLNEIRMYNIHQGGAGTTSQAASTSGAAAATASYV------- 4418
            :.:....|||        :|:::.....::.:.|....||:|.....:..:|...|..       
 Frog    90 LRMDNNAAAI--------KALELYKVNAKLCDPHPSKKGTSSSYLENNSKSAHNNSCTERKMNKK 146

  Fly  4419 ------PTVSGASLLPNLAVHEGIMQDRFTAEH-VIISAPKNAKPTCELQLPSMKKLMSNSSAQP 4476
                  ......:.|....|:|.:...|...:: .:|........:.|..:.|.:|...::..: 
 Frog   147 DLHGPRDDFKDVTFLSEEKVYEILELCREKEDYSPLIRVIGRVFSSAEALVQSFRKAKHHTKEE- 210

  Fly  4477 YFLRTLKIFMQVRDMYEAQNGLSTGGGVACGAGDNDDDIIDIEGDGGASGGSSSDMAPGSASTIS 4541
              |::|:...:.:|..|.:...|:...              :|.|.|||....||.:.|.     
 Frog   211 --LKSLQEKDEDKDEDEKEKAASSAAA--------------MEEDSGASSSRLSDNSQGD----- 254

  Fly  4542 PPPPMETNQIAQDGDDDEEDDDEA--RSFPGVGNHAVASASKSTKPTLSQILCLDVLWNTLSECL 4604
                   |.|.:.|.::...|.||  |.:     |.:.|..|.....|:                
 Frog   255 -------NNIQKLGPEEVSLDIEAVRRVY-----HRLLSNEKIETAFLN---------------- 291

  Fly  4605 VALEESKDEFAVLVLQPTVEAFFLIHASHRGASK---------KSGRSFMPNAAGFGLRAAAGAG 4660
                      |::.|.|.||.....|..:.....         ::|....|......|.....|.
 Frog   292 ----------ALVYLSPNVECDLTYHNVYSRDPNYLNLFIIVMENGNLHSPEYLEMALPLFCKAM 346

  Fly  4661 AIGGLGAAAP--------SAQE-------------YSPFMDDVSSAN------------------ 4686
            :...|.|.|.        ||::             |....::.:|.|                  
 Frog   347 SKLPLAAQAKLIRLWSKYSAEQIRRMMETFQQLITYKVISNEFNSRNLVNDDDAIVAATKCLKMV 411

  Fly  4687 -----------TPSSASFDDEPRMQDASTNT--------------PLVTNPSTSTAMSAHEAQLR 4726
                       |..:...|||| :.::|..|              |.|....|...:.:.:.   
 Frog   412 YYSNVVGGEIETDHNEEEDDEP-VPESSELTLQELLGEERRNKKGPRVDPLETELGVKSIDC--- 472

  Fly  4727 QDRQKFLQFAEKHRTVLNQILRQSPTHL-----SDGPFAVL--------VDHTRILDFDVK-RKY 4777
              |:..:.|.|.....||.:|.....:.     ::..|:.:        |.....|.:|.: |.|
 Frog   473 --RKPLIPFEEFVNEPLNDVLEMDKDYTFFKVETENKFSFMTCPFILNAVTKNLGLYYDNRIRMY 535

  Fly  4778 FQ---TELERLDEGIRREEH-TVSVRRVTVFEDSFRVLYRL------GPEEWKNRFYIVFEDEEG 4832
            .:   |.|..|.:|.:...: .:.|||..:.:|:   |.||      .|.:.|.:.|:.||.|:|
 Frog   536 SERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDA---LVRLEMIAMENPADLKKQLYVEFEGEQG 597

  Fly  4833 QDAGGLLREWYVIISREIFNPMYALFCVSPGDRVTYMINPSSHANPNHLSYFKFVGRVIAKAVHD 4897
            .|.||:.:|::.::..|||||...:|......:.:: .||||......   |..:|.|:..|:::
 Frog   598 VDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKHSW-FNPSSFETEGQ---FTLIGIVLGLAIYN 658

  Fly  4898 NKLLECYFTRSFYKHILGKQVKHTDMESQDYEFYKGLDYLMKNDISTLGYE--------LTFS-T 4953
            |.:|:.:|....|:.::||:....|:.......|:.|..|::       ||        :||. :
 Frog   659 NCILDVHFPMVVYRKLMGKKGTFRDLADSHPVLYQSLKELLE-------YEGNVEEDMMMTFQIS 716

  Fly  4954 EVQEFGVTQIRDLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDIIPKHLIS- 5017
            :...||...:.|||.||....:|.||:.|:|.|.....::.|:.:|..||..||      |::: 
 Frog   717 QTDLFGNPLMHDLKENGDKIPITNENRKEFVSLYTDYILNKSVEKQFKAFRRGF------HMVTN 775

  Fly  5018 ------IFNEQELELLISGLPDIDIEDLKANTEYH-KYTSKSAQIQWFWRALRSFDQADRAKFLQ 5075
                  :|..:|:||||.|..::|.:.||..|||. .||..|..|:.||..:.||.:..:..|||
 Frog   776 ESPLKYLFRPEEIELLICGSRNLDFQALKDTTEYDGGYTRDSNIIKEFWEIVNSFTEEQKRLFLQ 840

  Fly  5076 FVTGTSKVPLQGFGSLEGMNGIQKFQIHRDDRSTDRLPCAHTCFNQLDLPMYKSYDKLRSCLLKA 5140
            |.|||.:.|:.|.|.|       |..|.::...|||||.:|||||.|.||.|.:.:||:..||||
 Frog   841 FTTGTDRAPVGGLGKL-------KMIIAKNGPDTDRLPTSHTCFNVLLLPEYSNKEKLKERLLKA 898

  Fly  5141 IHECSEGFG 5149
            | ..::|||
 Frog   899 I-TYAKGFG 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HUWE1NP_001285288.1 DUF908 90..326 CDD:428721
DUF913 621..989 CDD:461803
UBA_like_SF 1467..1506 CDD:473871
WWE 1756..1828 CDD:128922
DUF5585 3288..3672 CDD:465521
UBM 3670..3700 CDD:464159
UBM 3719..3746 CDD:464159
HECTc 4796..5149 CDD:238033 122/375 (33%)
ube3aXP_012812141.1 AZUL 58..112 CDD:465173 14/66 (21%)
HECTc 556..906 CDD:238033 122/377 (32%)
Blue background indicates that the domain is not in the aligned region.

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